Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AL078603.1-201ENST00000603824 313 ntBASIC1.27□□□□□ -2.21
PMS2P54278 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
PMS2P54278 RNU6-690P-201ENST00000365242 106 ntBASIC1.26□□□□□ -2.21
PMS2P54278 Y_RNA.563-201ENST00000384707 108 ntBASIC1.26□□□□□ -2.21
PMS2P54278 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
PMS2P54278 AL606753.1-201ENST00000427435 87 ntBASIC1.26□□□□□ -2.21
PMS2P54278 AC008267.6-201ENST00000441664 139 ntBASIC1.26□□□□□ -2.21
PMS2P54278 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
PMS2P54278 RNU6-240P-201ENST00000516098 97 ntBASIC1.26□□□□□ -2.21
PMS2P54278 RNU6-62P-201ENST00000516526 102 ntBASIC1.26□□□□□ -2.21
PMS2P54278 RNU6-1234P-201ENST00000516877 103 ntBASIC1.26□□□□□ -2.21
PMS2P54278 AC133485.4-201ENST00000561835 220 ntBASIC1.26□□□□□ -2.21
PMS2P54278 AC138907.4-201ENST00000570107 226 ntBASIC1.26□□□□□ -2.21
PMS2P54278 HSPE1P19-201ENST00000603327 295 ntBASIC1.26□□□□□ -2.21
PMS2P54278 AL137067.1-201ENST00000615933 120 ntBASIC1.26□□□□□ -2.21
PMS2P54278 Y_RNA.366-201ENST00000365540 102 ntBASIC1.25□□□□□ -2.21
PMS2P54278 SNORA19-201ENST00000384737 128 ntBASIC1.25□□□□□ -2.21
PMS2P54278 MIR548I2-201ENST00000408348 149 ntBASIC1.25□□□□□ -2.21
PMS2P54278 RNA5SP144-201ENST00000410846 116 ntBASIC1.25□□□□□ -2.21
PMS2P54278 SNORA31.2-201ENST00000516019 134 ntBASIC1.25□□□□□ -2.21
PMS2P54278 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.25□□□□□ -2.21
PMS2P54278 MIR4305-201ENST00000583252 102 ntBASIC1.25□□□□□ -2.21
PMS2P54278 MIR6734-201ENST00000621166 68 ntBASIC1.25□□□□□ -2.21
PMS2P54278 U2.22-201ENST00000636441 106 ntBASIC1.25□□□□□ -2.21
PMS2P54278 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
PMS2P54278 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
PMS2P54278 SNORD115-2-201ENST00000362842 82 ntBASIC1.24□□□□□ -2.21
PMS2P54278 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
PMS2P54278 SNORD115-20-201ENST00000365099 82 ntBASIC1.24□□□□□ -2.21
PMS2P54278 SNORD114-22-201ENST00000365423 72 ntBASIC1.24□□□□□ -2.21
PMS2P54278 RNU6-1168P-201ENST00000390831 104 ntBASIC1.24□□□□□ -2.21
PMS2P54278 SNORA40.6-201ENST00000391153 128 ntBASIC1.24□□□□□ -2.21
PMS2P54278 RNU6-1190P-201ENST00000410811 104 ntBASIC1.24□□□□□ -2.21
PMS2P54278 RNA5SP136-201ENST00000410906 107 ntBASIC1.24□□□□□ -2.21
PMS2P54278 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.24□□□□□ -2.21
PMS2P54278 RPS3AP1-201ENST00000413190 320 ntBASIC1.24□□□□□ -2.21
PMS2P54278 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
PMS2P54278 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.24□□□□□ -2.21
PMS2P54278 RNU7-45P-201ENST00000459460 63 ntBASIC1.24□□□□□ -2.21
PMS2P54278 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
PMS2P54278 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.24□□□□□ -2.21
PMS2P54278 SNORA1.1-201ENST00000364671 133 ntBASIC1.23□□□□□ -2.21
PMS2P54278 Y_RNA.298-201ENST00000364960 107 ntBASIC1.23□□□□□ -2.21
PMS2P54278 SNORD58C-201ENST00000365223 64 ntBASIC1.23□□□□□ -2.21
PMS2P54278 Y_RNA.354-201ENST00000365448 111 ntBASIC1.23□□□□□ -2.21
PMS2P54278 RNU6-42P-201ENST00000384165 107 ntBASIC1.23□□□□□ -2.21
PMS2P54278 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
PMS2P54278 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
PMS2P54278 MIR1185-1-201ENST00000408598 86 ntBASIC1.23□□□□□ -2.21
PMS2P54278 RNU6-602P-201ENST00000411155 105 ntBASIC1.23□□□□□ -2.21
PMS2P54278 RNU5E-3P-201ENST00000515913 68 ntBASIC1.23□□□□□ -2.21
PMS2P54278 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
PMS2P54278 AL365222.1-201ENST00000614661 98 ntBASIC1.23□□□□□ -2.21
PMS2P54278 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
PMS2P54278 AC090844.1-201ENST00000422019 156 ntBASIC1.22□□□□□ -2.21
PMS2P54278 HMGN1P33-201ENST00000432945 451 ntBASIC1.22□□□□□ -2.21
PMS2P54278 RNU7-107P-201ENST00000459121 61 ntBASIC1.22□□□□□ -2.21
PMS2P54278 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
PMS2P54278 RNU6-772P-201ENST00000516042 105 ntBASIC1.22□□□□□ -2.21
PMS2P54278 RNA5SP220-201ENST00000516298 104 ntBASIC1.22□□□□□ -2.21
PMS2P54278 RNU2-35P-201ENST00000516446 142 ntBASIC1.22□□□□□ -2.21
PMS2P54278 AC021443.1-201ENST00000604478 211 ntBASIC1.22□□□□□ -2.21
PMS2P54278 MIR3914-2-201ENST00000637339 95 ntBASIC1.22□□□□□ -2.21
PMS2P54278 SNORA22.1-201ENST00000362701 134 ntBASIC1.21□□□□□ -2.22
PMS2P54278 RNA5SP205-201ENST00000364653 136 ntBASIC1.21□□□□□ -2.22
PMS2P54278 RNU6-396P-201ENST00000365369 105 ntBASIC1.21□□□□□ -2.22
PMS2P54278 SNORD38B-201ENST00000384690 67 ntBASIC1.21□□□□□ -2.22
PMS2P54278 MT-TN-201ENST00000387400 73 ntBASIC1.21□□□□□ -2.22
PMS2P54278 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PMS2P54278 AL022718.1-201ENST00000412004 84 ntBASIC1.21□□□□□ -2.22
PMS2P54278 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
PMS2P54278 AC244023.1-201ENST00000426884 112 ntBASIC1.21□□□□□ -2.22
PMS2P54278 RNU7-164P-201ENST00000459221 62 ntBASIC1.21□□□□□ -2.22
PMS2P54278 COX6CP6-201ENST00000490840 228 ntBASIC1.21□□□□□ -2.22
PMS2P54278 RNU6-1333P-201ENST00000516162 93 ntBASIC1.21□□□□□ -2.22
PMS2P54278 RNU6-781P-201ENST00000516377 101 ntBASIC1.21□□□□□ -2.22
PMS2P54278 RNU6-1258P-201ENST00000516911 111 ntBASIC1.21□□□□□ -2.22
PMS2P54278 AC242498.1-201ENST00000604134 111 ntBASIC1.21□□□□□ -2.22
PMS2P54278 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
PMS2P54278 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PMS2P54278 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PMS2P54278 SNORA25.3-201ENST00000363205 127 ntBASIC1.2□□□□□ -2.22
PMS2P54278 Y_RNA.261-201ENST00000364631 102 ntBASIC1.2□□□□□ -2.22
PMS2P54278 RNU4-16P-201ENST00000364737 141 ntBASIC1.2□□□□□ -2.22
PMS2P54278 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
PMS2P54278 RNU2-51P-201ENST00000410708 197 ntBASIC1.2□□□□□ -2.22
PMS2P54278 RNU7-123P-201ENST00000515911 60 ntBASIC1.2□□□□□ -2.22
PMS2P54278 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
PMS2P54278 AC004812.1-201ENST00000540773 146 ntBASIC1.2□□□□□ -2.22
PMS2P54278 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
PMS2P54278 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
PMS2P54278 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
PMS2P54278 RNU6-580P-201ENST00000365159 107 ntBASIC1.19□□□□□ -2.22
PMS2P54278 Y_RNA.346-201ENST00000365385 112 ntBASIC1.19□□□□□ -2.22
PMS2P54278 RNU6-1081P-201ENST00000384537 107 ntBASIC1.19□□□□□ -2.22
PMS2P54278 Y_RNA.531-201ENST00000384589 121 ntBASIC1.19□□□□□ -2.22
PMS2P54278 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
PMS2P54278 RNU6-613P-201ENST00000410412 108 ntBASIC1.19□□□□□ -2.22
PMS2P54278 Y_RNA.630-201ENST00000411370 108 ntBASIC1.19□□□□□ -2.22
PMS2P54278 AC113410.1-201ENST00000505029 247 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms