Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 RNU6-1018P-201ENST00000516577 106 ntBASIC1.49□□□□□ -2.17
TTC3P53804 SNORD14A-201ENST00000606526 91 ntBASIC1.49□□□□□ -2.17
TTC3P53804 AL627230.6-201ENST00000611129 280 ntBASIC1.49□□□□□ -2.17
TTC3P53804 AP001318.4-201ENST00000616637 121 ntBASIC1.49□□□□□ -2.17
TTC3P53804 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TTC3P53804 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
TTC3P53804 AC080100.1-201ENST00000624239 5356 ntBASIC1.49□□□□□ -2.17
TTC3P53804 RNU6-1123P-201ENST00000362347 106 ntBASIC1.49□□□□□ -2.17
TTC3P53804 MIR1270-201ENST00000459320 83 ntBASIC1.49□□□□□ -2.17
TTC3P53804 RNU6-1258P-201ENST00000516911 111 ntBASIC1.49□□□□□ -2.17
TTC3P53804 SNORA4-201ENST00000584302 138 ntBASIC1.49□□□□□ -2.17
TTC3P53804 MIR424-201ENST00000362227 98 ntBASIC1.48□□□□□ -2.17
TTC3P53804 U8.6-201ENST00000364939 135 ntBASIC1.48□□□□□ -2.17
TTC3P53804 Y_RNA.309-201ENST00000365046 111 ntBASIC1.48□□□□□ -2.17
TTC3P53804 MIR605-201ENST00000385078 83 ntBASIC1.48□□□□□ -2.17
TTC3P53804 RNU6-554P-201ENST00000410466 106 ntBASIC1.48□□□□□ -2.17
TTC3P53804 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.48□□□□□ -2.17
TTC3P53804 RNU6-917P-201ENST00000516294 104 ntBASIC1.48□□□□□ -2.17
TTC3P53804 SNORA74.3-201ENST00000517108 154 ntBASIC1.48□□□□□ -2.17
TTC3P53804 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TTC3P53804 RNA5SP212-201ENST00000391223 107 ntBASIC1.47□□□□□ -2.17
TTC3P53804 RNA5SP144-201ENST00000410846 116 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AL031737.1-201ENST00000450125 223 ntBASIC1.47□□□□□ -2.17
TTC3P53804 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AC087741.2-201ENST00000619415 172 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
TTC3P53804 SNORD115-19-201ENST00000363098 82 ntBASIC1.47□□□□□ -2.17
TTC3P53804 SNORD115-18-201ENST00000363293 82 ntBASIC1.47□□□□□ -2.17
TTC3P53804 SNORD115-17-201ENST00000364612 82 ntBASIC1.47□□□□□ -2.17
TTC3P53804 Y_RNA.470-201ENST00000384307 117 ntBASIC1.47□□□□□ -2.17
TTC3P53804 RNU6-905P-201ENST00000384434 107 ntBASIC1.47□□□□□ -2.17
TTC3P53804 MIR577-201ENST00000385196 96 ntBASIC1.47□□□□□ -2.17
TTC3P53804 SNORD12C-201ENST00000386307 89 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AL451046.2-201ENST00000403074 277 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AL512326.2-201ENST00000426359 151 ntBASIC1.47□□□□□ -2.17
TTC3P53804 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
TTC3P53804 RNU6-537P-201ENST00000517277 103 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AC022523.2-201ENST00000561045 150 ntBASIC1.47□□□□□ -2.17
TTC3P53804 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.47□□□□□ -2.17
TTC3P53804 AC243994.1-201ENST00000618627 109 ntBASIC1.47□□□□□ -2.17
TTC3P53804 RNU6-832P-201ENST00000363319 107 ntBASIC1.46□□□□□ -2.18
TTC3P53804 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
TTC3P53804 AC021613.1-201ENST00000623880 111 ntBASIC1.46□□□□□ -2.18
TTC3P53804 MIR6767-201ENST00000637302 66 ntBASIC1.46□□□□□ -2.18
TTC3P53804 SNORA1.1-201ENST00000364671 133 ntBASIC1.45□□□□□ -2.18
TTC3P53804 RNA5SP261-201ENST00000410536 106 ntBASIC1.45□□□□□ -2.18
TTC3P53804 AC107297.1-201ENST00000459991 176 ntBASIC1.45□□□□□ -2.18
TTC3P53804 RNA5SP33-201ENST00000516687 98 ntBASIC1.45□□□□□ -2.18
TTC3P53804 MIR5009-201ENST00000578736 100 ntBASIC1.45□□□□□ -2.18
TTC3P53804 AL357312.1-201ENST00000603879 298 ntBASIC1.45□□□□□ -2.18
TTC3P53804 GHRLOS.1-201ENST00000610995 70 ntBASIC1.45□□□□□ -2.18
TTC3P53804 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
TTC3P53804 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TTC3P53804 JTBP1-201ENST00000441314 247 ntBASIC1.45□□□□□ -2.18
TTC3P53804 SNORA40.13-201ENST00000516379 120 ntBASIC1.45□□□□□ -2.18
TTC3P53804 RNU7-193P-201ENST00000516723 65 ntBASIC1.45□□□□□ -2.18
TTC3P53804 MIR3163-201ENST00000581592 73 ntBASIC1.45□□□□□ -2.18
TTC3P53804 FAM71BP1-201ENST00000604431 523 ntBASIC1.45□□□□□ -2.18
TTC3P53804 AL773524.1-201ENST00000614065 229 ntBASIC1.45□□□□□ -2.18
TTC3P53804 MIR2052-201ENST00000636055 55 ntBASIC1.45□□□□□ -2.18
TTC3P53804 RNU6-1099P-201ENST00000363533 107 ntBASIC1.44□□□□□ -2.18
TTC3P53804 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
TTC3P53804 AL161935.2-201ENST00000414627 60 ntBASIC1.44□□□□□ -2.18
TTC3P53804 RNA5SP276-201ENST00000362580 94 ntBASIC1.44□□□□□ -2.18
TTC3P53804 Y_RNA.430-201ENST00000384081 110 ntBASIC1.44□□□□□ -2.18
TTC3P53804 MIR548D2-201ENST00000384955 97 ntBASIC1.44□□□□□ -2.18
TTC3P53804 RPS23P4-201ENST00000487908 423 ntBASIC1.44□□□□□ -2.18
TTC3P53804 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.44□□□□□ -2.18
TTC3P53804 AL513534.2-201ENST00000603836 250 ntBASIC1.44□□□□□ -2.18
TTC3P53804 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.44□□□□□ -2.18
TTC3P53804 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TTC3P53804 SNORD115-2-201ENST00000362842 82 ntBASIC1.43□□□□□ -2.18
TTC3P53804 RNU6-363P-201ENST00000362895 105 ntBASIC1.43□□□□□ -2.18
TTC3P53804 RNU4-67P-201ENST00000364569 141 ntBASIC1.43□□□□□ -2.18
TTC3P53804 SNORD115-20-201ENST00000365099 82 ntBASIC1.43□□□□□ -2.18
TTC3P53804 RNU6-1321P-201ENST00000390905 107 ntBASIC1.43□□□□□ -2.18
TTC3P53804 RMST_2.1-201ENST00000617263 136 ntBASIC1.43□□□□□ -2.18
TTC3P53804 MIR8065-201ENST00000620577 100 ntBASIC1.43□□□□□ -2.18
TTC3P53804 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
TTC3P53804 RNU4-36P-201ENST00000364294 144 ntBASIC1.42□□□□□ -2.18
TTC3P53804 SNORD114-22-201ENST00000365423 72 ntBASIC1.42□□□□□ -2.18
TTC3P53804 Y_RNA.540-201ENST00000384638 111 ntBASIC1.42□□□□□ -2.18
TTC3P53804 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
TTC3P53804 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TTC3P53804 AC090844.1-201ENST00000422019 156 ntBASIC1.42□□□□□ -2.18
TTC3P53804 AC245047.7-201ENST00000440265 293 ntBASIC1.42□□□□□ -2.18
TTC3P53804 snoU13.2-201ENST00000459201 104 ntBASIC1.42□□□□□ -2.18
TTC3P53804 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
TTC3P53804 RNU7-35P-201ENST00000517174 62 ntBASIC1.42□□□□□ -2.18
TTC3P53804 RNU6-94P-201ENST00000607728 107 ntBASIC1.42□□□□□ -2.18
TTC3P53804 Y_RNA.818-201ENST00000618813 71 ntBASIC1.42□□□□□ -2.18
TTC3P53804 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
TTC3P53804 Y_RNA.224-201ENST00000364308 111 ntBASIC1.42□□□□□ -2.18
TTC3P53804 Y_RNA.354-201ENST00000365448 111 ntBASIC1.42□□□□□ -2.18
TTC3P53804 SNORD38B-201ENST00000384690 67 ntBASIC1.42□□□□□ -2.18
TTC3P53804 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
TTC3P53804 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
TTC3P53804 uc_338.28-201ENST00000612082 187 ntBASIC1.42□□□□□ -2.18
TTC3P53804 SNORD38B-202ENST00000625943 69 ntBASIC1.42□□□□□ -2.18
TTC3P53804 MIR1255B1-201ENST00000636325 63 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms