Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR4305-201ENST00000583252 102 ntBASIC1.44□□□□□ -2.18
COPB1P53618 RNU6-1081P-201ENST00000384537 107 ntBASIC1.43□□□□□ -2.18
COPB1P53618 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COPB1P53618 AC090844.1-201ENST00000422019 156 ntBASIC1.43□□□□□ -2.18
COPB1P53618 RNU6-947P-201ENST00000516264 106 ntBASIC1.43□□□□□ -2.18
COPB1P53618 RNU6-1061P-201ENST00000516530 99 ntBASIC1.43□□□□□ -2.18
COPB1P53618 AC021443.1-201ENST00000604478 211 ntBASIC1.43□□□□□ -2.18
COPB1P53618 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
COPB1P53618 Y_RNA.298-201ENST00000364960 107 ntBASIC1.42□□□□□ -2.18
COPB1P53618 RNU6-1258P-201ENST00000516911 111 ntBASIC1.42□□□□□ -2.18
COPB1P53618 PRELID3BP2-201ENST00000605362 201 ntBASIC1.42□□□□□ -2.18
COPB1P53618 MIR6078-201ENST00000611069 100 ntBASIC1.42□□□□□ -2.18
COPB1P53618 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.42□□□□□ -2.18
COPB1P53618 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
COPB1P53618 RNA5SP261-201ENST00000410536 106 ntBASIC1.41□□□□□ -2.18
COPB1P53618 RNA5SP136-201ENST00000410906 107 ntBASIC1.41□□□□□ -2.18
COPB1P53618 RNU6-1054P-201ENST00000411293 104 ntBASIC1.41□□□□□ -2.18
COPB1P53618 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.41□□□□□ -2.18
COPB1P53618 RPL39P39-201ENST00000455840 151 ntBASIC1.41□□□□□ -2.18
COPB1P53618 RNU7-164P-201ENST00000459221 62 ntBASIC1.41□□□□□ -2.18
COPB1P53618 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
COPB1P53618 RNU7-123P-201ENST00000515911 60 ntBASIC1.41□□□□□ -2.18
COPB1P53618 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.41□□□□□ -2.18
COPB1P53618 MIR3152-201ENST00000579801 74 ntBASIC1.41□□□□□ -2.18
COPB1P53618 AC025166.1-201ENST00000612411 163 ntBASIC1.41□□□□□ -2.18
COPB1P53618 MIR6504-201ENST00000613520 61 ntBASIC1.41□□□□□ -2.18
COPB1P53618 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COPB1P53618 SNORA22.1-201ENST00000362701 134 ntBASIC1.4□□□□□ -2.19
COPB1P53618 SNORA25.3-201ENST00000363205 127 ntBASIC1.4□□□□□ -2.19
COPB1P53618 Y_RNA.353-201ENST00000365440 108 ntBASIC1.4□□□□□ -2.19
COPB1P53618 MIR1263-201ENST00000408324 86 ntBASIC1.4□□□□□ -2.19
COPB1P53618 RNU6-602P-201ENST00000411155 105 ntBASIC1.4□□□□□ -2.19
COPB1P53618 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.4□□□□□ -2.19
COPB1P53618 RNY4P20-201ENST00000516678 93 ntBASIC1.4□□□□□ -2.19
COPB1P53618 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
COPB1P53618 Y_RNA.171-201ENST00000363760 102 ntBASIC1.39□□□□□ -2.19
COPB1P53618 Y_RNA.191-201ENST00000363972 113 ntBASIC1.39□□□□□ -2.19
COPB1P53618 SNORA1.1-201ENST00000364671 133 ntBASIC1.39□□□□□ -2.19
COPB1P53618 RNU6-1104P-201ENST00000384723 104 ntBASIC1.39□□□□□ -2.19
COPB1P53618 MIR1185-1-201ENST00000408598 86 ntBASIC1.39□□□□□ -2.19
COPB1P53618 RPS3AP1-201ENST00000413190 320 ntBASIC1.39□□□□□ -2.19
COPB1P53618 AL512326.2-201ENST00000426359 151 ntBASIC1.39□□□□□ -2.19
COPB1P53618 AL078603.1-201ENST00000603824 313 ntBASIC1.39□□□□□ -2.19
COPB1P53618 MIR8065-201ENST00000620577 100 ntBASIC1.39□□□□□ -2.19
COPB1P53618 MTND5P18-201ENST00000445624 1801 ntBASIC1.38□□□□□ -2.19
COPB1P53618 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
COPB1P53618 SNORD115-2-201ENST00000362842 82 ntBASIC1.38□□□□□ -2.19
COPB1P53618 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
COPB1P53618 SNORD115-20-201ENST00000365099 82 ntBASIC1.38□□□□□ -2.19
COPB1P53618 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
COPB1P53618 MT-TI-201ENST00000387365 69 ntBASIC1.38□□□□□ -2.19
COPB1P53618 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
COPB1P53618 AC244023.1-201ENST00000426884 112 ntBASIC1.38□□□□□ -2.19
COPB1P53618 RNU6-893P-201ENST00000458841 100 ntBASIC1.38□□□□□ -2.19
COPB1P53618 COX6CP6-201ENST00000490840 228 ntBASIC1.38□□□□□ -2.19
COPB1P53618 AC004812.1-201ENST00000540773 146 ntBASIC1.38□□□□□ -2.19
COPB1P53618 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
COPB1P53618 MIR548AI-201ENST00000579940 88 ntBASIC1.38□□□□□ -2.19
COPB1P53618 AC242498.1-201ENST00000604134 111 ntBASIC1.38□□□□□ -2.19
COPB1P53618 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
COPB1P53618 U6.95-201ENST00000636931 70 ntBASIC1.38□□□□□ -2.19
COPB1P53618 Y_RNA.346-201ENST00000365385 112 ntBASIC1.37□□□□□ -2.19
COPB1P53618 Y_RNA.528-201ENST00000384575 108 ntBASIC1.37□□□□□ -2.19
COPB1P53618 Y_RNA.531-201ENST00000384589 121 ntBASIC1.37□□□□□ -2.19
COPB1P53618 AL022718.1-201ENST00000412004 84 ntBASIC1.37□□□□□ -2.19
COPB1P53618 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
COPB1P53618 AC022523.2-201ENST00000561045 150 ntBASIC1.37□□□□□ -2.19
COPB1P53618 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
COPB1P53618 AL359881.1-201ENST00000602916 267 ntBASIC1.37□□□□□ -2.19
COPB1P53618 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
COPB1P53618 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
COPB1P53618 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
COPB1P53618 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
COPB1P53618 RNU6-1290P-201ENST00000362957 109 ntBASIC1.36□□□□□ -2.19
COPB1P53618 Y_RNA.198-201ENST00000364013 98 ntBASIC1.36□□□□□ -2.19
COPB1P53618 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
COPB1P53618 AC245047.7-201ENST00000440265 293 ntBASIC1.36□□□□□ -2.19
COPB1P53618 AC048334.1-201ENST00000477975 159 ntBASIC1.36□□□□□ -2.19
COPB1P53618 SNORD33.1-201ENST00000516213 88 ntBASIC1.36□□□□□ -2.19
COPB1P53618 RNU11-2P-201ENST00000516898 142 ntBASIC1.36□□□□□ -2.19
COPB1P53618 RNU6-834P-201ENST00000362367 110 ntBASIC1.35□□□□□ -2.19
COPB1P53618 Y_RNA.470-201ENST00000384307 117 ntBASIC1.35□□□□□ -2.19
COPB1P53618 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
COPB1P53618 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
COPB1P53618 AC113410.1-201ENST00000505029 247 ntBASIC1.35□□□□□ -2.19
COPB1P53618 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
COPB1P53618 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
COPB1P53618 MIR103A2-201ENST00000362154 78 ntBASIC1.34□□□□□ -2.19
COPB1P53618 Y_RNA.354-201ENST00000365448 111 ntBASIC1.34□□□□□ -2.19
COPB1P53618 Y_RNA.363-201ENST00000365529 113 ntBASIC1.34□□□□□ -2.19
COPB1P53618 RNU6-42P-201ENST00000384165 107 ntBASIC1.34□□□□□ -2.19
COPB1P53618 RNU6-735P-201ENST00000410612 107 ntBASIC1.34□□□□□ -2.19
COPB1P53618 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.34□□□□□ -2.19
COPB1P53618 RNU7-113P-201ENST00000459273 62 ntBASIC1.34□□□□□ -2.19
COPB1P53618 RPS23P4-201ENST00000487908 423 ntBASIC1.34□□□□□ -2.19
COPB1P53618 RNA5SP220-201ENST00000516298 104 ntBASIC1.34□□□□□ -2.19
COPB1P53618 MIR4452-201ENST00000583004 71 ntBASIC1.34□□□□□ -2.19
COPB1P53618 Y_RNA.273-201ENST00000364703 102 ntBASIC1.33□□□□□ -2.2
COPB1P53618 RNU6-396P-201ENST00000365369 105 ntBASIC1.33□□□□□ -2.2
COPB1P53618 SNORD12C-201ENST00000386307 89 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms