Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNU6-1149P-201ENST00000516810 97 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 AC004812.1-201ENST00000540773 146 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 MIR548X2-201ENST00000579776 100 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 RNU6-508P-201ENST00000363231 103 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 RNU6-978P-201ENST00000364371 103 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 SNORD38B-201ENST00000384690 67 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 AC107297.1-201ENST00000459991 176 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 RNU11-2P-201ENST00000516898 142 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 AL022345.2-201ENST00000606307 135 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 SNORD38B-202ENST00000625943 69 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
HCFC1P51610 RNA5SP264-201ENST00000363115 107 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 Y_RNA.280-201ENST00000364765 112 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 Y_RNA.366-201ENST00000365540 102 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 AL591704.2-201ENST00000421658 181 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 RNU6-1211P-201ENST00000459179 105 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 RNU7-90P-201ENST00000459216 62 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 RNU7-113P-201ENST00000459273 62 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 AP003716.2-201ENST00000528260 108 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 AL096861.1-201ENST00000610899 123 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 AL137067.1-201ENST00000615933 120 ntBASIC0.87□□□□□ -2.27
HCFC1P51610 Y_RNA.168-201ENST00000363740 102 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 SNORA51.10-201ENST00000384418 136 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 RNU6-893P-201ENST00000458841 100 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 SCARNA15-202ENST00000516881 127 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 MIR548AO-201ENST00000579992 96 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 MIR4305-201ENST00000583252 102 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HCFC1P51610 RNU1-124P-201ENST00000363861 145 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 RNU6-647P-201ENST00000364243 107 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 SNORD113.3-201ENST00000364630 78 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 RNU6-1062P-201ENST00000383908 107 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 Y_RNA.617-201ENST00000410920 90 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 AL022718.1-201ENST00000412004 84 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 RNY4P20-201ENST00000516678 93 ntBASIC0.86□□□□□ -2.27
HCFC1P51610 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.86□□□□□ -2.27
HCFC1P51610 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
HCFC1P51610 AC010332.2-201ENST00000613083 1904 ntBASIC0.85□□□□□ -2.27
HCFC1P51610 MIR103A2-201ENST00000362154 78 ntBASIC0.85□□□□□ -2.27
HCFC1P51610 Y_RNA.294-201ENST00000364916 102 ntBASIC0.85□□□□□ -2.27
HCFC1P51610 SNORD37.2-201ENST00000391075 66 ntBASIC0.85□□□□□ -2.27
HCFC1P51610 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.85□□□□□ -2.27
HCFC1P51610 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.85□□□□□ -2.27
HCFC1P51610 Y_RNA.440-201ENST00000384120 114 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 Y_RNA.464-201ENST00000384282 110 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 Y_RNA.497-201ENST00000384447 98 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 SNORA40-201ENST00000388090 126 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 SNORD111-201ENST00000408139 94 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 RNA5SP272-201ENST00000516095 111 ntBASIC0.84□□□□□ -2.27
HCFC1P51610 Y_RNA.218-201ENST00000364218 104 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 RNU6-364P-201ENST00000384387 107 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 MTND4LP9-201ENST00000427694 174 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 HMGN1P33-201ENST00000432945 451 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.84□□□□□ -2.28
HCFC1P51610 RPS23P4-201ENST00000487908 423 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 RNU6-1234P-201ENST00000516877 103 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.28
HCFC1P51610 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HCFC1P51610 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 MIR539-201ENST00000365690 78 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 RNU6-959P-201ENST00000384671 107 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 RNA5SP95-201ENST00000410319 137 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 RNU7-123P-201ENST00000515911 60 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 RNU6-772P-201ENST00000516042 105 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 RNU6-240P-201ENST00000516098 97 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 MIR376A2-201ENST00000636782 80 ntBASIC0.83□□□□□ -2.28
HCFC1P51610 Y_RNA.49-201ENST00000362714 112 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 RNU6-654P-201ENST00000364373 107 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 MT-TF-201ENST00000387314 71 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 RNU7-62P-201ENST00000458856 62 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 RNU2-35P-201ENST00000516446 142 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.82□□□□□ -2.28
HCFC1P51610 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.82□□□□□ -2.28
HCFC1P51610 MIR3910-1-201ENST00000580936 111 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 RNU6-704P-201ENST00000364162 103 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 Y_RNA.521-201ENST00000384560 114 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 Y_RNA.531-201ENST00000384589 121 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 AC063976.4-201ENST00000421971 163 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 SUMO1P3-201ENST00000439961 304 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 RNA5SP436-201ENST00000516020 115 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 AC108081.1-201ENST00000604358 221 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.82□□□□□ -2.28
HCFC1P51610 RNU6-774P-201ENST00000363238 107 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
HCFC1P51610 RNA5SP144-201ENST00000410846 116 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 MTATP6P21-201ENST00000440681 189 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 AP001340.1-201ENST00000624405 217 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 Y_RNA.215-201ENST00000364204 112 ntBASIC0.81□□□□□ -2.28
HCFC1P51610 Y_RNA.430-201ENST00000384081 110 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms