Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-747P-201ENST00000390928 104 ntBASIC1.09□□□□□ -2.23
CLK1P49759 RNU6-241P-201ENST00000391148 104 ntBASIC1.09□□□□□ -2.23
CLK1P49759 RNA5SP144-201ENST00000410846 116 ntBASIC1.09□□□□□ -2.23
CLK1P49759 RNU6-177P-201ENST00000411257 104 ntBASIC1.09□□□□□ -2.23
CLK1P49759 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.23
CLK1P49759 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
CLK1P49759 RNU2-35P-201ENST00000516446 142 ntBASIC1.09□□□□□ -2.23
CLK1P49759 RNU6-62P-201ENST00000516526 102 ntBASIC1.09□□□□□ -2.23
CLK1P49759 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.09□□□□□ -2.23
CLK1P49759 AL157834.3-201ENST00000615543 103 ntBASIC1.09□□□□□ -2.23
CLK1P49759 AL137067.1-201ENST00000615933 120 ntBASIC1.09□□□□□ -2.23
CLK1P49759 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CLK1P49759 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
CLK1P49759 RNA5SP48-201ENST00000363969 126 ntBASIC1.08□□□□□ -2.24
CLK1P49759 RNU6-1187P-201ENST00000364771 110 ntBASIC1.08□□□□□ -2.24
CLK1P49759 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
CLK1P49759 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
CLK1P49759 RNU6-1154P-201ENST00000391001 104 ntBASIC1.08□□□□□ -2.24
CLK1P49759 AC063976.4-201ENST00000421971 163 ntBASIC1.08□□□□□ -2.24
CLK1P49759 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.08□□□□□ -2.24
CLK1P49759 AC133485.4-201ENST00000561835 220 ntBASIC1.08□□□□□ -2.24
CLK1P49759 AC138907.4-201ENST00000570107 226 ntBASIC1.08□□□□□ -2.24
CLK1P49759 MIR6717-201ENST00000622747 73 ntBASIC1.08□□□□□ -2.24
CLK1P49759 Z97988.1-201ENST00000637697 135 ntBASIC1.08□□□□□ -2.24
CLK1P49759 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
CLK1P49759 Y_RNA.298-201ENST00000364960 107 ntBASIC1.07□□□□□ -2.24
CLK1P49759 Y_RNA.430-201ENST00000384081 110 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNU6-1067P-201ENST00000384752 107 ntBASIC1.07□□□□□ -2.24
CLK1P49759 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.07□□□□□ -2.24
CLK1P49759 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
CLK1P49759 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNU7-123P-201ENST00000515911 60 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNU6-313P-201ENST00000516317 112 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNU6-1061P-201ENST00000516530 99 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNY4P20-201ENST00000516678 93 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNU6-1258P-201ENST00000516911 111 ntBASIC1.07□□□□□ -2.24
CLK1P49759 MIR4305-201ENST00000583252 102 ntBASIC1.07□□□□□ -2.24
CLK1P49759 AC021443.1-201ENST00000604478 211 ntBASIC1.07□□□□□ -2.24
CLK1P49759 snoU13.31-201ENST00000607291 104 ntBASIC1.07□□□□□ -2.24
CLK1P49759 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
CLK1P49759 RNU1-36P-201ENST00000365130 165 ntBASIC1.06□□□□□ -2.24
CLK1P49759 Y_RNA.353-201ENST00000365440 108 ntBASIC1.06□□□□□ -2.24
CLK1P49759 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
CLK1P49759 MT-TI-201ENST00000387365 69 ntBASIC1.06□□□□□ -2.24
CLK1P49759 MIR1185-1-201ENST00000408598 86 ntBASIC1.06□□□□□ -2.24
CLK1P49759 RNU6-1054P-201ENST00000411293 104 ntBASIC1.06□□□□□ -2.24
CLK1P49759 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
CLK1P49759 SNORD33.1-201ENST00000516213 88 ntBASIC1.06□□□□□ -2.24
CLK1P49759 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.06□□□□□ -2.24
CLK1P49759 SNORA22.1-201ENST00000362701 134 ntBASIC1.05□□□□□ -2.24
CLK1P49759 SNORA25.3-201ENST00000363205 127 ntBASIC1.05□□□□□ -2.24
CLK1P49759 RNU6-1081P-201ENST00000384537 107 ntBASIC1.05□□□□□ -2.24
CLK1P49759 RNU6-1104P-201ENST00000384723 104 ntBASIC1.05□□□□□ -2.24
CLK1P49759 RNU7-164P-201ENST00000459221 62 ntBASIC1.05□□□□□ -2.24
CLK1P49759 RNU6-947P-201ENST00000516264 106 ntBASIC1.05□□□□□ -2.24
CLK1P49759 AC022523.2-201ENST00000561045 150 ntBASIC1.05□□□□□ -2.24
CLK1P49759 AC025166.1-201ENST00000612411 163 ntBASIC1.05□□□□□ -2.24
CLK1P49759 MTND5P18-201ENST00000445624 1801 ntBASIC1.04□□□□□ -2.24
CLK1P49759 Y_RNA.171-201ENST00000363760 102 ntBASIC1.04□□□□□ -2.24
CLK1P49759 MIR1263-201ENST00000408324 86 ntBASIC1.04□□□□□ -2.24
CLK1P49759 RNU6-735P-201ENST00000410612 107 ntBASIC1.04□□□□□ -2.24
CLK1P49759 RNA5SP136-201ENST00000410906 107 ntBASIC1.04□□□□□ -2.24
CLK1P49759 RNU6-602P-201ENST00000411155 105 ntBASIC1.04□□□□□ -2.24
CLK1P49759 AL512326.2-201ENST00000426359 151 ntBASIC1.04□□□□□ -2.24
CLK1P49759 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.04□□□□□ -2.24
CLK1P49759 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.04□□□□□ -2.24
CLK1P49759 PRELID3BP2-201ENST00000605362 201 ntBASIC1.04□□□□□ -2.24
CLK1P49759 AC211469.2-201ENST00000605461 205 ntBASIC1.04□□□□□ -2.24
CLK1P49759 SNORD115-2-201ENST00000362842 82 ntBASIC1.03□□□□□ -2.24
CLK1P49759 SNORA1.1-201ENST00000364671 133 ntBASIC1.03□□□□□ -2.24
CLK1P49759 SNORD115-20-201ENST00000365099 82 ntBASIC1.03□□□□□ -2.24
CLK1P49759 Y_RNA.528-201ENST00000384575 108 ntBASIC1.03□□□□□ -2.24
CLK1P49759 AC245047.7-201ENST00000440265 293 ntBASIC1.03□□□□□ -2.24
CLK1P49759 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
CLK1P49759 COX6CP6-201ENST00000490840 228 ntBASIC1.03□□□□□ -2.24
CLK1P49759 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.03□□□□□ -2.24
CLK1P49759 AC004812.1-201ENST00000540773 146 ntBASIC1.03□□□□□ -2.24
CLK1P49759 MIR4498-201ENST00000577599 66 ntBASIC1.03□□□□□ -2.24
CLK1P49759 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
CLK1P49759 U6.95-201ENST00000636931 70 ntBASIC1.03□□□□□ -2.24
CLK1P49759 RNU6-1290P-201ENST00000362957 109 ntBASIC1.02□□□□□ -2.25
CLK1P49759 RNA5SP264-201ENST00000363115 107 ntBASIC1.02□□□□□ -2.25
CLK1P49759 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
CLK1P49759 Y_RNA.470-201ENST00000384307 117 ntBASIC1.02□□□□□ -2.25
CLK1P49759 Y_RNA.531-201ENST00000384589 121 ntBASIC1.02□□□□□ -2.25
CLK1P49759 RNA5SP261-201ENST00000410536 106 ntBASIC1.02□□□□□ -2.25
CLK1P49759 RPS3AP1-201ENST00000413190 320 ntBASIC1.02□□□□□ -2.25
CLK1P49759 AC244023.1-201ENST00000426884 112 ntBASIC1.02□□□□□ -2.25
CLK1P49759 MIR1270-201ENST00000459320 83 ntBASIC1.02□□□□□ -2.25
CLK1P49759 AC048334.1-201ENST00000477975 159 ntBASIC1.02□□□□□ -2.25
CLK1P49759 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.02□□□□□ -2.25
CLK1P49759 PDCD5P2-201ENST00000507570 312 ntBASIC1.02□□□□□ -2.25
CLK1P49759 MIR3152-201ENST00000579801 74 ntBASIC1.02□□□□□ -2.25
CLK1P49759 AC242498.1-201ENST00000604134 111 ntBASIC1.02□□□□□ -2.25
CLK1P49759 MIR6516-201ENST00000630554 81 ntBASIC1.02□□□□□ -2.25
CLK1P49759 Y_RNA.198-201ENST00000364013 98 ntBASIC1.01□□□□□ -2.25
CLK1P49759 Y_RNA.273-201ENST00000364703 102 ntBASIC1.01□□□□□ -2.25
CLK1P49759 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
CLK1P49759 SNORA80D-201ENST00000384488 135 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms