Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 Y_RNA.508-201ENST00000384502 114 ntBASIC1.05□□□□□ -2.24
CENPAP49450 MIR518E-201ENST00000385252 88 ntBASIC1.05□□□□□ -2.24
CENPAP49450 SNORD12C-201ENST00000386307 89 ntBASIC1.05□□□□□ -2.24
CENPAP49450 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
CENPAP49450 RNU6-893P-201ENST00000458841 100 ntBASIC1.05□□□□□ -2.24
CENPAP49450 AP001328.1-201ENST00000528550 176 ntBASIC1.05□□□□□ -2.24
CENPAP49450 AC011603.4-201ENST00000611325 277 ntBASIC1.05□□□□□ -2.24
CENPAP49450 AL353770.2-201ENST00000620024 78 ntBASIC1.05□□□□□ -2.24
CENPAP49450 MIR377-201ENST00000362145 69 ntBASIC1.04□□□□□ -2.24
CENPAP49450 RNU6-349P-201ENST00000362402 107 ntBASIC1.04□□□□□ -2.24
CENPAP49450 Y_RNA.116-201ENST00000363292 103 ntBASIC1.04□□□□□ -2.24
CENPAP49450 Y_RNA.343-201ENST00000365354 112 ntBASIC1.04□□□□□ -2.24
CENPAP49450 Y_RNA.430-201ENST00000384081 110 ntBASIC1.04□□□□□ -2.24
CENPAP49450 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
CENPAP49450 MIR588-201ENST00000384900 83 ntBASIC1.04□□□□□ -2.24
CENPAP49450 MIR569-201ENST00000385228 96 ntBASIC1.04□□□□□ -2.24
CENPAP49450 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
CENPAP49450 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
CENPAP49450 RNA5SP272-201ENST00000516095 111 ntBASIC1.04□□□□□ -2.24
CENPAP49450 RNU6-240P-201ENST00000516098 97 ntBASIC1.04□□□□□ -2.24
CENPAP49450 RNU6-346P-201ENST00000516288 111 ntBASIC1.04□□□□□ -2.24
CENPAP49450 Y_RNA.692-201ENST00000516627 105 ntBASIC1.04□□□□□ -2.24
CENPAP49450 AC133485.4-201ENST00000561835 220 ntBASIC1.04□□□□□ -2.24
CENPAP49450 AC138907.4-201ENST00000570107 226 ntBASIC1.04□□□□□ -2.24
CENPAP49450 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
CENPAP49450 RNU6-1237P-201ENST00000384777 107 ntBASIC1.03□□□□□ -2.24
CENPAP49450 MIR942-201ENST00000401111 86 ntBASIC1.03□□□□□ -2.24
CENPAP49450 AL022718.1-201ENST00000412004 84 ntBASIC1.03□□□□□ -2.24
CENPAP49450 AC067940.1-201ENST00000458411 300 ntBASIC1.03□□□□□ -2.24
CENPAP49450 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
CENPAP49450 RNU6-426P-201ENST00000516464 97 ntBASIC1.03□□□□□ -2.24
CENPAP49450 MIR4661-201ENST00000582720 75 ntBASIC1.03□□□□□ -2.24
CENPAP49450 MIR6504-201ENST00000613520 61 ntBASIC1.03□□□□□ -2.24
CENPAP49450 Y_RNA.355-201ENST00000365462 98 ntBASIC1.02□□□□□ -2.25
CENPAP49450 MIR200A-201ENST00000384875 90 ntBASIC1.02□□□□□ -2.25
CENPAP49450 RNA5SP237-201ENST00000410414 113 ntBASIC1.02□□□□□ -2.25
CENPAP49450 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.02□□□□□ -2.25
CENPAP49450 Y_RNA.651-201ENST00000459380 103 ntBASIC1.02□□□□□ -2.25
CENPAP49450 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
CENPAP49450 RNU6-113P-201ENST00000516653 101 ntBASIC1.02□□□□□ -2.25
CENPAP49450 AC021443.1-201ENST00000604478 211 ntBASIC1.02□□□□□ -2.25
CENPAP49450 MIR7111-201ENST00000619751 72 ntBASIC1.02□□□□□ -2.25
CENPAP49450 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CENPAP49450 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
CENPAP49450 RNU6-1062P-201ENST00000383908 107 ntBASIC1.01□□□□□ -2.25
CENPAP49450 Y_RNA.506-201ENST00000384494 102 ntBASIC1.01□□□□□ -2.25
CENPAP49450 RNA5SP144-201ENST00000410846 116 ntBASIC1.01□□□□□ -2.25
CENPAP49450 POLR2J4-204ENST00000418424 324 ntBASIC1.01□□□□□ -2.25
CENPAP49450 snoU13.2-201ENST00000459201 104 ntBASIC1.01□□□□□ -2.25
CENPAP49450 Y_RNA.757-201ENST00000578934 114 ntBASIC1.01□□□□□ -2.25
CENPAP49450 MIR4305-201ENST00000583252 102 ntBASIC1.01□□□□□ -2.25
CENPAP49450 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
CENPAP49450 MIR6740-201ENST00000618268 113 ntBASIC1.01□□□□□ -2.25
CENPAP49450 MIR6841-201ENST00000637129 72 ntBASIC1.01□□□□□ -2.25
CENPAP49450 AC010332.2-201ENST00000613083 1904 ntBASIC1□□□□□ -2.25
CENPAP49450 Y_RNA.171-201ENST00000363760 102 ntBASIC1□□□□□ -2.25
CENPAP49450 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
CENPAP49450 RNU6-580P-201ENST00000365159 107 ntBASIC1□□□□□ -2.25
CENPAP49450 RNY1P5-201ENST00000383890 115 ntBASIC1□□□□□ -2.25
CENPAP49450 RNU6-1165P-201ENST00000410119 107 ntBASIC1□□□□□ -2.25
CENPAP49450 SNORD83.1-201ENST00000411362 77 ntBASIC1□□□□□ -2.25
CENPAP49450 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
CENPAP49450 RNU7-113P-201ENST00000459273 62 ntBASIC1□□□□□ -2.25
CENPAP49450 AC113410.1-201ENST00000505029 247 ntBASIC1□□□□□ -2.25
CENPAP49450 AP001340.1-201ENST00000624405 217 ntBASIC1□□□□□ -2.25
CENPAP49450 RNU6-774P-201ENST00000363238 107 ntBASIC0.99□□□□□ -2.25
CENPAP49450 RNU6-934P-201ENST00000365154 107 ntBASIC0.99□□□□□ -2.25
CENPAP49450 Y_RNA.366-201ENST00000365540 102 ntBASIC0.99□□□□□ -2.25
CENPAP49450 RPL39P25-201ENST00000449384 154 ntBASIC0.99□□□□□ -2.25
CENPAP49450 RNU7-164P-201ENST00000459221 62 ntBASIC0.99□□□□□ -2.25
CENPAP49450 snoU13.21-201ENST00000459368 105 ntBASIC0.99□□□□□ -2.25
CENPAP49450 MIR100-201ENST00000385259 80 ntBASIC0.98□□□□□ -2.25
CENPAP49450 SNORD89-201ENST00000390981 114 ntBASIC0.98□□□□□ -2.25
CENPAP49450 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.98□□□□□ -2.25
CENPAP49450 MIR4771-2-201ENST00000577758 74 ntBASIC0.98□□□□□ -2.25
CENPAP49450 MIR3121-201ENST00000579680 77 ntBASIC0.98□□□□□ -2.25
CENPAP49450 MIR4771-1-201ENST00000582617 74 ntBASIC0.98□□□□□ -2.25
CENPAP49450 MIR3133-201ENST00000583157 78 ntBASIC0.98□□□□□ -2.25
CENPAP49450 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
CENPAP49450 AL137067.1-201ENST00000615933 120 ntBASIC0.98□□□□□ -2.25
CENPAP49450 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.98□□□□□ -2.25
CENPAP49450 MIR1-1-201ENST00000362147 71 ntBASIC0.97□□□□□ -2.25
CENPAP49450 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
CENPAP49450 SNORA18-201ENST00000384416 132 ntBASIC0.97□□□□□ -2.25
CENPAP49450 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.97□□□□□ -2.25
CENPAP49450 AC015818.7-201ENST00000428754 109 ntBASIC0.97□□□□□ -2.25
CENPAP49450 AC087499.7-201ENST00000441958 109 ntBASIC0.97□□□□□ -2.25
CENPAP49450 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
CENPAP49450 RNU6-1258P-201ENST00000516911 111 ntBASIC0.97□□□□□ -2.25
CENPAP49450 U7.2-201ENST00000607576 63 ntBASIC0.97□□□□□ -2.25
CENPAP49450 AC091895.1-201ENST00000624494 256 ntBASIC0.97□□□□□ -2.25
CENPAP49450 Y_RNA.114-201ENST00000363265 113 ntBASIC0.96□□□□□ -2.26
CENPAP49450 Y_RNA.294-201ENST00000364916 102 ntBASIC0.96□□□□□ -2.26
CENPAP49450 Y_RNA.568-201ENST00000384742 113 ntBASIC0.96□□□□□ -2.26
CENPAP49450 SNORA40-201ENST00000388090 126 ntBASIC0.96□□□□□ -2.26
CENPAP49450 AL512326.2-201ENST00000426359 151 ntBASIC0.96□□□□□ -2.26
CENPAP49450 PDCD5P2-201ENST00000507570 312 ntBASIC0.96□□□□□ -2.26
CENPAP49450 RNU2-35P-201ENST00000516446 142 ntBASIC0.96□□□□□ -2.26
CENPAP49450 RNA5SP33-201ENST00000516687 98 ntBASIC0.96□□□□□ -2.26
CENPAP49450 Y_RNA.703-201ENST00000516846 111 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms