Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNA5SP247-201ENST00000411181 105 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
NKX2-1P43699 RNU6-1110P-201ENST00000516462 101 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 Y_RNA.692-201ENST00000516627 105 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 Y_RNA.757-201ENST00000578934 114 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 MIR4781-201ENST00000585250 76 ntBASIC0.86□□□□□ -2.27
NKX2-1P43699 SNORA22.1-201ENST00000362701 134 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 Y_RNA.568-201ENST00000384742 113 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 MIR942-201ENST00000401111 86 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 RNU6-1086P-201ENST00000410930 100 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 HMGN1P33-201ENST00000432945 451 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 Y_RNA.690-201ENST00000516603 95 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 snoU13.31-201ENST00000607291 104 ntBASIC0.85□□□□□ -2.27
NKX2-1P43699 MIR342-201ENST00000362212 99 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 RNU6-309P-201ENST00000364573 106 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 MT-TF-201ENST00000387314 71 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 RNA5SP255-201ENST00000516370 107 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 AC025627.3-201ENST00000582078 182 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
NKX2-1P43699 U7.2-201ENST00000607576 63 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 AL136317.1-201ENST00000612653 226 ntBASIC0.84□□□□□ -2.27
NKX2-1P43699 MIR30D-201ENST00000362283 70 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 Y_RNA.8-201ENST00000362353 102 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 AC067940.1-201ENST00000458411 300 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 RNU7-45P-201ENST00000459460 63 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 AC113410.1-201ENST00000505029 247 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 Y_RNA.686-201ENST00000516548 134 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 AP001328.1-201ENST00000528550 176 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 MIR4305-201ENST00000583252 102 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 SNORD114-21-201ENST00000606412 72 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 MIR6740-201ENST00000618268 113 ntBASIC0.83□□□□□ -2.28
NKX2-1P43699 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
NKX2-1P43699 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 RNU6-915P-201ENST00000364943 103 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 Y_RNA.343-201ENST00000365354 112 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 MIR588-201ENST00000384900 83 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 AL022718.1-201ENST00000412004 84 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 RNU7-62P-201ENST00000458856 62 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 RNU6-1258P-201ENST00000516911 111 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 AC023827.1-201ENST00000569247 97 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 TUG1_4.1-201ENST00000619464 181 ntBASIC0.82□□□□□ -2.28
NKX2-1P43699 AC010332.2-201ENST00000613083 1904 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 RNU6-369P-201ENST00000362515 102 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.164-201ENST00000363709 102 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 RNU6-647P-201ENST00000364243 107 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.299-201ENST00000364973 94 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 RNU6-690P-201ENST00000365242 106 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.420-201ENST00000384043 110 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.531-201ENST00000384589 121 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 SNORD12C-201ENST00000386307 89 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 RNU6-460P-201ENST00000391158 108 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 RNU6-1165P-201ENST00000410119 107 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.617-201ENST00000410920 90 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 RPS26P5-201ENST00000418544 335 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 TRMT112P2-201ENST00000512910 132 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.703-201ENST00000516846 111 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 AC133485.4-201ENST00000561835 220 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 AC138907.4-201ENST00000570107 226 ntBASIC0.81□□□□□ -2.28
NKX2-1P43699 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
NKX2-1P43699 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
NKX2-1P43699 AL603825.1-201ENST00000438481 80 ntBASIC0.8□□□□□ -2.28
NKX2-1P43699 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
NKX2-1P43699 RNU7-35P-201ENST00000517174 62 ntBASIC0.8□□□□□ -2.28
NKX2-1P43699 AL078603.1-201ENST00000603824 313 ntBASIC0.8□□□□□ -2.28
NKX2-1P43699 AL662814.1-201ENST00000617364 121 ntBASIC0.8□□□□□ -2.28
NKX2-1P43699 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 Y_RNA.298-201ENST00000364960 107 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 RNU6-934P-201ENST00000365154 107 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 Y_RNA.327-201ENST00000365201 102 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 MIR613-201ENST00000385248 95 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 SNORA40-201ENST00000388090 126 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 RNU6-205P-201ENST00000390858 107 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 AL158147.1-201ENST00000443970 75 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.79□□□□□ -2.28
NKX2-1P43699 SNORA25.12-201ENST00000516202 82 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 RNU2-35P-201ENST00000516446 142 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 AC004812.1-201ENST00000540773 146 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 AL359821.1-201ENST00000605519 182 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 AL137067.1-201ENST00000615933 120 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 AC091895.1-201ENST00000624494 256 ntBASIC0.79□□□□□ -2.28
NKX2-1P43699 Y_RNA.114-201ENST00000363265 113 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 SNORA25.9-201ENST00000365087 128 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 RNU6-949P-201ENST00000384040 107 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 RNA5SP95-201ENST00000410319 137 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 RNU6-994P-201ENST00000410507 111 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 RNA5SP136-201ENST00000410906 107 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 MTND4LP9-201ENST00000427694 174 ntBASIC0.78□□□□□ -2.28
NKX2-1P43699 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms