Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC023827.1-201ENST00000569247 97 ntBASIC1.03□□□□□ -2.24
PTPN9P43378 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PTPN9P43378 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.03□□□□□ -2.24
PTPN9P43378 RNU6-690P-201ENST00000365242 106 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 MIR569-201ENST00000385228 96 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 RNU6-205P-201ENST00000390858 107 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 RNA5SP95-201ENST00000410319 137 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 RNA5SP144-201ENST00000410846 116 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 POLR2J4-204ENST00000418424 324 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 MIR18B-201ENST00000454574 71 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 Y_RNA.676-201ENST00000516393 96 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 Y_RNA.690-201ENST00000516603 95 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 RNU6-255P-201ENST00000516957 105 ntBASIC1.02□□□□□ -2.25
PTPN9P43378 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 Y_RNA.488-201ENST00000384403 102 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 MT-TF-201ENST00000387314 71 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 MT-TR-201ENST00000387439 65 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 AC067940.1-201ENST00000458411 300 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 Y_RNA.651-201ENST00000459380 103 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 MIR6740-201ENST00000618268 113 ntBASIC1.01□□□□□ -2.25
PTPN9P43378 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
PTPN9P43378 AL022718.1-201ENST00000412004 84 ntBASIC1□□□□□ -2.25
PTPN9P43378 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
PTPN9P43378 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
PTPN9P43378 SNORA25.12-201ENST00000516202 82 ntBASIC1□□□□□ -2.25
PTPN9P43378 RNU6-1110P-201ENST00000516462 101 ntBASIC1□□□□□ -2.25
PTPN9P43378 Y_RNA.686-201ENST00000516548 134 ntBASIC1□□□□□ -2.25
PTPN9P43378 Y_RNA.692-201ENST00000516627 105 ntBASIC1□□□□□ -2.25
PTPN9P43378 Y_RNA.757-201ENST00000578934 114 ntBASIC1□□□□□ -2.25
PTPN9P43378 MIR4661-201ENST00000582720 75 ntBASIC1□□□□□ -2.25
PTPN9P43378 AL136317.1-201ENST00000612653 226 ntBASIC1□□□□□ -2.25
PTPN9P43378 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1□□□□□ -2.25
PTPN9P43378 SNORD115-2-201ENST00000362842 82 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU6-309P-201ENST00000364573 106 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU4-16P-201ENST00000364737 141 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 SNORD115-20-201ENST00000365099 82 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU6-1062P-201ENST00000383908 107 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 Y_RNA.506-201ENST00000384494 102 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 SNORD12C-201ENST00000386307 89 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU6-460P-201ENST00000391158 108 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 MIR1827-201ENST00000408549 66 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU6-1165P-201ENST00000410119 107 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU6-994P-201ENST00000410507 111 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 UBL5P1-201ENST00000507979 193 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 AP001328.1-201ENST00000528550 176 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 AC133485.4-201ENST00000561835 220 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 AC138907.4-201ENST00000570107 226 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 MIR3121-201ENST00000579680 77 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 MIR4305-201ENST00000583252 102 ntBASIC0.99□□□□□ -2.25
PTPN9P43378 RNU6-915P-201ENST00000364943 103 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 Y_RNA.420-201ENST00000384043 110 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 MIR942-201ENST00000401111 86 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 AC113410.1-201ENST00000505029 247 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 RNA5SP102-201ENST00000516865 106 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 RNU6-94P-201ENST00000607728 107 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 MIR8070-201ENST00000616510 88 ntBASIC0.98□□□□□ -2.25
PTPN9P43378 Y_RNA.343-201ENST00000365354 112 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 RNU6-240P-201ENST00000516098 97 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 U7.2-201ENST00000607576 63 ntBASIC0.97□□□□□ -2.25
PTPN9P43378 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
PTPN9P43378 MIR30D-201ENST00000362283 70 ntBASIC0.96□□□□□ -2.26
PTPN9P43378 RNU6-934P-201ENST00000365154 107 ntBASIC0.96□□□□□ -2.26
PTPN9P43378 RPS26P5-201ENST00000418544 335 ntBASIC0.96□□□□□ -2.26
PTPN9P43378 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
PTPN9P43378 AC021443.1-201ENST00000604478 211 ntBASIC0.96□□□□□ -2.26
PTPN9P43378 AL662814.1-201ENST00000617364 121 ntBASIC0.96□□□□□ -2.26
PTPN9P43378 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 Y_RNA.280-201ENST00000364765 112 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 SNORA25.9-201ENST00000365087 128 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 RNA5SP237-201ENST00000410414 113 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 RNU6-1086P-201ENST00000410930 100 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 RNU7-113P-201ENST00000459273 62 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.95□□□□□ -2.26
PTPN9P43378 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.94□□□□□ -2.26
PTPN9P43378 AC010332.2-201ENST00000613083 1904 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 RNU6-369P-201ENST00000362515 102 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 SNORD50.2-201ENST00000365465 70 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 Y_RNA.568-201ENST00000384742 113 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 RNU7-164P-201ENST00000459221 62 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 RNU6-426P-201ENST00000516464 97 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 RNU6-1258P-201ENST00000516911 111 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 MIR6504-201ENST00000613520 61 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 uc_338.6-201ENST00000613544 171 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 TUG1_4.1-201ENST00000619464 181 ntBASIC0.94□□□□□ -2.26
PTPN9P43378 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
PTPN9P43378 RNU6-508P-201ENST00000363231 103 ntBASIC0.93□□□□□ -2.26
PTPN9P43378 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
PTPN9P43378 RNU6-647P-201ENST00000364243 107 ntBASIC0.93□□□□□ -2.26
PTPN9P43378 Y_RNA.299-201ENST00000364973 94 ntBASIC0.93□□□□□ -2.26
PTPN9P43378 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
PTPN9P43378 RNU6-746P-201ENST00000384112 109 ntBASIC0.93□□□□□ -2.26
PTPN9P43378 Y_RNA.531-201ENST00000384589 121 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms