Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 Y_RNA.65-201ENST00000362846 100 ntBASIC0.41□□□□□ -2.34
SAA4P35542 Y_RNA.121-201ENST00000363309 113 ntBASIC0.41□□□□□ -2.34
SAA4P35542 SNORD27-201ENST00000363981 72 ntBASIC0.41□□□□□ -2.34
SAA4P35542 MIR568-201ENST00000385036 95 ntBASIC0.41□□□□□ -2.34
SAA4P35542 SNORD58.1-201ENST00000391313 66 ntBASIC0.41□□□□□ -2.34
SAA4P35542 RNU6-493P-201ENST00000391321 108 ntBASIC0.41□□□□□ -2.34
SAA4P35542 MIR936-201ENST00000401264 98 ntBASIC0.41□□□□□ -2.34
SAA4P35542 MIR1302-3-201ENST00000408128 138 ntBASIC0.41□□□□□ -2.34
SAA4P35542 Y_RNA.797-201ENST00000515977 94 ntBASIC0.41□□□□□ -2.34
SAA4P35542 RNU7-70P-201ENST00000516941 66 ntBASIC0.41□□□□□ -2.34
SAA4P35542 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.41□□□□□ -2.34
SAA4P35542 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
SAA4P35542 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SAA4P35542 Y_RNA.20-201ENST00000362479 113 ntBASIC0.4□□□□□ -2.35
SAA4P35542 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
SAA4P35542 Y_RNA.539-201ENST00000384635 107 ntBASIC0.4□□□□□ -2.35
SAA4P35542 MIR613-201ENST00000385248 95 ntBASIC0.4□□□□□ -2.35
SAA4P35542 MTND2P23-201ENST00000422990 651 ntBASIC0.4□□□□□ -2.35
SAA4P35542 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.4□□□□□ -2.35
SAA4P35542 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
SAA4P35542 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
SAA4P35542 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SAA4P35542 SNORA20-201ENST00000384662 132 ntBASIC0.39□□□□□ -2.35
SAA4P35542 RNA5SP237-201ENST00000410414 113 ntBASIC0.39□□□□□ -2.35
SAA4P35542 RNA5SP127-201ENST00000411051 133 ntBASIC0.39□□□□□ -2.35
SAA4P35542 Y_RNA.626-201ENST00000411288 95 ntBASIC0.39□□□□□ -2.35
SAA4P35542 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
SAA4P35542 Y_RNA.668-201ENST00000516233 93 ntBASIC0.39□□□□□ -2.35
SAA4P35542 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.39□□□□□ -2.35
SAA4P35542 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
SAA4P35542 AL662814.1-201ENST00000617364 121 ntBASIC0.39□□□□□ -2.35
SAA4P35542 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.39□□□□□ -2.35
SAA4P35542 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
SAA4P35542 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
SAA4P35542 RNU6-923P-201ENST00000364753 107 ntBASIC0.38□□□□□ -2.35
SAA4P35542 Y_RNA.350-201ENST00000365409 98 ntBASIC0.38□□□□□ -2.35
SAA4P35542 RNU6-597P-201ENST00000365620 102 ntBASIC0.38□□□□□ -2.35
SAA4P35542 Y_RNA.477-201ENST00000384352 108 ntBASIC0.38□□□□□ -2.35
SAA4P35542 Y_RNA.478-201ENST00000384358 107 ntBASIC0.38□□□□□ -2.35
SAA4P35542 MIR216A-201ENST00000385063 110 ntBASIC0.38□□□□□ -2.35
SAA4P35542 MIR624-201ENST00000385217 97 ntBASIC0.38□□□□□ -2.35
SAA4P35542 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.38□□□□□ -2.35
SAA4P35542 SNORD93-201ENST00000408813 74 ntBASIC0.38□□□□□ -2.35
SAA4P35542 SCARNA15-202ENST00000516881 127 ntBASIC0.38□□□□□ -2.35
SAA4P35542 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
SAA4P35542 MIR4308-201ENST00000580634 81 ntBASIC0.38□□□□□ -2.35
SAA4P35542 AC021613.1-201ENST00000623880 111 ntBASIC0.38□□□□□ -2.35
SAA4P35542 MIR6841-201ENST00000637129 72 ntBASIC0.38□□□□□ -2.35
SAA4P35542 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SAA4P35542 Y_RNA.182-201ENST00000363880 111 ntBASIC0.37□□□□□ -2.35
SAA4P35542 RNU6-643P-201ENST00000384018 107 ntBASIC0.37□□□□□ -2.35
SAA4P35542 Y_RNA.571-201ENST00000384753 98 ntBASIC0.37□□□□□ -2.35
SAA4P35542 RNU6-679P-201ENST00000391003 106 ntBASIC0.37□□□□□ -2.35
SAA4P35542 AL157398.1-201ENST00000452981 186 ntBASIC0.37□□□□□ -2.35
SAA4P35542 RNU6-448P-201ENST00000517052 107 ntBASIC0.37□□□□□ -2.35
SAA4P35542 AC062037.2-201ENST00000610137 73 ntBASIC0.37□□□□□ -2.35
SAA4P35542 SNORA22.1-201ENST00000362701 134 ntBASIC0.36□□□□□ -2.35
SAA4P35542 Y_RNA.162-201ENST00000363683 102 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNA5SP117-201ENST00000365294 118 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNU4-70P-201ENST00000384579 139 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNA5SP193-201ENST00000410353 107 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNU4-83P-201ENST00000410863 133 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNU6-1045P-201ENST00000516321 107 ntBASIC0.36□□□□□ -2.35
SAA4P35542 SCARNA15.1-201ENST00000516384 125 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNU6-1149P-201ENST00000516810 97 ntBASIC0.36□□□□□ -2.35
SAA4P35542 AC092634.7-201ENST00000621022 103 ntBASIC0.36□□□□□ -2.35
SAA4P35542 RNU6-275P-201ENST00000364910 107 ntBASIC0.35□□□□□ -2.35
SAA4P35542 Y_RNA.393-201ENST00000383936 102 ntBASIC0.35□□□□□ -2.35
SAA4P35542 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
SAA4P35542 RNU6-893P-201ENST00000458841 100 ntBASIC0.35□□□□□ -2.35
SAA4P35542 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
SAA4P35542 RNU4-71P-201ENST00000516258 113 ntBASIC0.35□□□□□ -2.35
SAA4P35542 AC141846.1-201ENST00000568348 142 ntBASIC0.35□□□□□ -2.35
SAA4P35542 MIR3128-201ENST00000581957 66 ntBASIC0.35□□□□□ -2.35
SAA4P35542 RN7SL793P-201ENST00000583259 296 ntBASIC0.35□□□□□ -2.35
SAA4P35542 MIR8066-201ENST00000617280 78 ntBASIC0.35□□□□□ -2.35
SAA4P35542 Y_RNA.42-201ENST00000362660 108 ntBASIC0.34□□□□□ -2.36
SAA4P35542 SNORA25.7-201ENST00000364375 127 ntBASIC0.34□□□□□ -2.36
SAA4P35542 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
SAA4P35542 MIR3678-201ENST00000578455 94 ntBASIC0.34□□□□□ -2.36
SAA4P35542 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
SAA4P35542 U4.1-201ENST00000620349 87 ntBASIC0.34□□□□□ -2.36
SAA4P35542 SNORD114-23-201ENST00000363536 72 ntBASIC0.33□□□□□ -2.36
SAA4P35542 RNA5SP517-201ENST00000364724 117 ntBASIC0.33□□□□□ -2.36
SAA4P35542 Y_RNA.515-201ENST00000384535 112 ntBASIC0.33□□□□□ -2.36
SAA4P35542 RNY1P4-201ENST00000384595 115 ntBASIC0.33□□□□□ -2.36
SAA4P35542 Y_RNA.540-201ENST00000384638 111 ntBASIC0.33□□□□□ -2.36
SAA4P35542 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.33□□□□□ -2.36
SAA4P35542 AL118496.2-201ENST00000448300 230 ntBASIC0.33□□□□□ -2.36
SAA4P35542 RNU6-1023P-201ENST00000516137 106 ntBASIC0.33□□□□□ -2.36
SAA4P35542 SNORA25.12-201ENST00000516202 82 ntBASIC0.33□□□□□ -2.36
SAA4P35542 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
SAA4P35542 MRPS18CP4-201ENST00000535821 231 ntBASIC0.33□□□□□ -2.36
SAA4P35542 AL589743.1-201ENST00000551932 2712 ntBASIC0.33□□□□□ -2.36
SAA4P35542 MTND5P32-201ENST00000560711 1802 ntBASIC0.32□□□□□ -2.36
SAA4P35542 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
SAA4P35542 Y_RNA.75-201ENST00000362927 97 ntBASIC0.32□□□□□ -2.36
SAA4P35542 RNU5E-9P-201ENST00000411164 104 ntBASIC0.32□□□□□ -2.36
SAA4P35542 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms