Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-1299P-201ENST00000516316 100 ntBASIC0.18□□□□□ -2.38
SCN4AP35499 AC020891.4-201ENST00000605745 93 ntBASIC0.18□□□□□ -2.38
SCN4AP35499 Y_RNA.23-201ENST00000362496 106 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 RNU6-913P-201ENST00000390913 95 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 MIR1302-6-201ENST00000408466 90 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 Y_RNA.618-201ENST00000410949 107 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 SNORA68.3-201ENST00000515906 83 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 Y_RNA.711-201ENST00000516993 102 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 MIR4282-201ENST00000583613 67 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 uc_338.16-201ENST00000621804 95 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 Y_RNA.91-201ENST00000363042 107 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 SNORD114-15-201ENST00000364687 72 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 RNU6-1165P-201ENST00000410119 107 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.17□□□□□ -2.38
SCN4AP35499 SNORA31.14-201ENST00000516728 116 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 MIR3612-201ENST00000579753 87 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.17□□□□□ -2.38
SCN4AP35499 AL356055.1-201ENST00000602528 446 ntBASIC0.17□□□□□ -2.38
SCN4AP35499 Y_RNA.117-201ENST00000363294 101 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 RNU6-1099P-201ENST00000363533 107 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 RNY1P8-201ENST00000383970 114 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 RNU6-1160P-201ENST00000384546 104 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 RNU6-713P-201ENST00000384761 107 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 AP003072.1-201ENST00000531740 145 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.16□□□□□ -2.38
SCN4AP35499 RNU6-238P-201ENST00000363313 106 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.357-201ENST00000365487 109 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.376-201ENST00000365638 108 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 RNU6-1227P-201ENST00000383981 107 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.430-201ENST00000384081 110 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.536-201ENST00000384621 113 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.590-201ENST00000410140 107 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 RNU6-758P-201ENST00000516292 89 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.679-201ENST00000516416 91 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 RNA5SP134-201ENST00000516492 96 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 RNU7-70P-201ENST00000516941 66 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 MIR3129-201ENST00000581095 76 ntBASIC0.15□□□□□ -2.38
SCN4AP35499 Y_RNA.176-201ENST00000363815 109 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 Y_RNA.216-201ENST00000364205 93 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 Y_RNA.276-201ENST00000364732 109 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU6-923P-201ENST00000364753 107 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU4-17P-201ENST00000365598 141 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 Y_RNA.423-201ENST00000384057 113 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 SNRPGP12-201ENST00000449481 213 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 snoU13.19-201ENST00000459148 104 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU7-96P-201ENST00000459535 64 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU6-848P-201ENST00000515948 107 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU6-617P-201ENST00000516147 107 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU6-473P-201ENST00000516164 107 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 RNU6-1049P-201ENST00000516414 107 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 AC096720.1-201ENST00000604441 183 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 AL442067.1-201ENST00000613261 223 ntBASIC0.15□□□□□ -2.39
SCN4AP35499 SNORA25.1-201ENST00000362326 128 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 RNU6-1272P-201ENST00000362776 107 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 RNU4-58P-201ENST00000363192 141 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 RNA5SP331-201ENST00000364986 107 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 RNU6-639P-201ENST00000384074 107 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 MIR624-201ENST00000385217 97 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 MIR616-201ENST00000385293 97 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 MT-TW-201ENST00000387382 68 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 Y_RNA.617-201ENST00000410920 90 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 RNU6-561P-201ENST00000516222 102 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 MIR3678-201ENST00000578455 94 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 MIR4676-201ENST00000583078 72 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 AL596211.1-201ENST00000569873 2277 ntBASIC0.14□□□□□ -2.39
SCN4AP35499 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNU6-103P-201ENST00000363686 107 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.170-201ENST00000363746 110 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.202-201ENST00000364083 110 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.262-201ENST00000364641 102 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNU6-702P-201ENST00000364982 107 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.352-201ENST00000365439 102 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.416-201ENST00000384014 113 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 SNORD12C-201ENST00000386307 89 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNA5SP237-201ENST00000410414 113 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNU6-1086P-201ENST00000410930 100 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.13□□□□□ -2.39
SCN4AP35499 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 MIR6717-201ENST00000622747 73 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
SCN4AP35499 MIR30D-201ENST00000362283 70 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNU6-653P-201ENST00000363074 106 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.214-201ENST00000364201 112 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.237-201ENST00000364439 102 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 Y_RNA.299-201ENST00000364973 94 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 MIR1257-201ENST00000408490 117 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 AC096949.1-201ENST00000412047 152 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNU6-469P-201ENST00000516253 101 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 RNU6-1153P-201ENST00000516760 105 ntBASIC0.13□□□□□ -2.39
SCN4AP35499 AC010332.2-201ENST00000613083 1904 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 Y_RNA.47-201ENST00000362697 108 ntBASIC0.12□□□□□ -2.39
SCN4AP35499 RNU6-403P-201ENST00000363163 104 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms