Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTCYBP9-201ENST00000431021 303 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 RNU6-327P-201ENST00000516270 127 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 AL360085.1-201ENST00000604713 532 ntBASIC0.52□□□□□ -2.33
HOXD13P35453 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
HOXD13P35453 Y_RNA.65-201ENST00000362846 100 ntBASIC0.51□□□□□ -2.33
HOXD13P35453 snoU13.18-201ENST00000459483 104 ntBASIC0.51□□□□□ -2.33
HOXD13P35453 RNU2-4P-201ENST00000606190 192 ntBASIC0.51□□□□□ -2.33
HOXD13P35453 uc_338.16-201ENST00000621804 95 ntBASIC0.51□□□□□ -2.33
HOXD13P35453 MIR376A2-201ENST00000636782 80 ntBASIC0.51□□□□□ -2.33
HOXD13P35453 SNORA25.7-201ENST00000364375 127 ntBASIC0.5□□□□□ -2.33
HOXD13P35453 RNU4-70P-201ENST00000384579 139 ntBASIC0.5□□□□□ -2.33
HOXD13P35453 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
HOXD13P35453 AC002350.1-201ENST00000490759 375 ntBASIC0.5□□□□□ -2.33
HOXD13P35453 RNU6-448P-201ENST00000517052 107 ntBASIC0.5□□□□□ -2.33
HOXD13P35453 AC092634.7-201ENST00000621022 103 ntBASIC0.5□□□□□ -2.33
HOXD13P35453 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
HOXD13P35453 RNU6-978P-201ENST00000364371 103 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 RNU6-342P-201ENST00000384521 104 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 MIR624-201ENST00000385217 97 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 RNU6-1045P-201ENST00000516321 107 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 RNY3P16-201ENST00000516338 101 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 AL662814.1-201ENST00000617364 121 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 AC021613.1-201ENST00000623880 111 ntBASIC0.49□□□□□ -2.33
HOXD13P35453 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 Y_RNA.20-201ENST00000362479 113 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 Y_RNA.118-201ENST00000363300 101 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 Y_RNA.182-201ENST00000363880 111 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 Y_RNA.350-201ENST00000365409 98 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 RNU6-643P-201ENST00000384018 107 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 Y_RNA.571-201ENST00000384753 98 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 RNU6-679P-201ENST00000391003 106 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 RNU4-71P-201ENST00000516258 113 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
HOXD13P35453 MIR6515-201ENST00000619843 57 ntBASIC0.48□□□□□ -2.33
HOXD13P35453 SNORA22.1-201ENST00000362701 134 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 RNU6-923P-201ENST00000364753 107 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 SNORD58.1-201ENST00000391313 66 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 RNU4-83P-201ENST00000410863 133 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 Y_RNA.626-201ENST00000411288 95 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 MTND2P23-201ENST00000422990 651 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 AC008608.1-201ENST00000603910 127 ntBASIC0.47□□□□□ -2.33
HOXD13P35453 Y_RNA.133-201ENST00000363428 110 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 Y_RNA.162-201ENST00000363683 102 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 RNY1-201ENST00000364228 113 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 Y_RNA.668-201ENST00000516233 93 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 AC062037.2-201ENST00000610137 73 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 MIR7111-201ENST00000619751 72 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 PVT1_3.1-201ENST00000620853 95 ntBASIC0.46□□□□□ -2.34
HOXD13P35453 Y_RNA.477-201ENST00000384352 108 ntBASIC0.45□□□□□ -2.34
HOXD13P35453 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.45□□□□□ -2.34
HOXD13P35453 RNU6-1149P-201ENST00000516810 97 ntBASIC0.45□□□□□ -2.34
HOXD13P35453 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HOXD13P35453 AC090625.1-201ENST00000357130 210 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 RNU6-275P-201ENST00000364910 107 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 Y_RNA.521-201ENST00000384560 114 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 AL118496.2-201ENST00000448300 230 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.44□□□□□ -2.34
HOXD13P35453 SNORA25.12-201ENST00000516202 82 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 RNU6-469P-201ENST00000516253 101 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 AP003327.1-201ENST00000529684 127 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 U4.1-201ENST00000620349 87 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 MIR6841-201ENST00000637129 72 ntBASIC0.44□□□□□ -2.34
HOXD13P35453 RNU5E-9P-201ENST00000411164 104 ntBASIC0.43□□□□□ -2.34
HOXD13P35453 AC141846.1-201ENST00000568348 142 ntBASIC0.43□□□□□ -2.34
HOXD13P35453 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.43□□□□□ -2.34
HOXD13P35453 SNORA20.1-201ENST00000364790 130 ntBASIC0.42□□□□□ -2.34
HOXD13P35453 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
HOXD13P35453 SCARNA15-202ENST00000516881 127 ntBASIC0.42□□□□□ -2.34
HOXD13P35453 MIR4308-201ENST00000580634 81 ntBASIC0.42□□□□□ -2.34
HOXD13P35453 RNU6-403P-201ENST00000363163 104 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 Y_RNA.539-201ENST00000384635 107 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 MIR598-201ENST00000384868 97 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 RNA5SP94-201ENST00000516917 108 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 MIR3678-201ENST00000578455 94 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 MIR8066-201ENST00000617280 78 ntBASIC0.41□□□□□ -2.34
HOXD13P35453 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 Y_RNA.42-201ENST00000362660 108 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 Y_RNA.75-201ENST00000362927 97 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 RNU6-597P-201ENST00000365620 102 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 Y_RNA.540-201ENST00000384638 111 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 U8.15-201ENST00000390947 134 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 RNU6-1023P-201ENST00000516137 106 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 RNU6-765P-201ENST00000516916 99 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 MIR3128-201ENST00000581957 66 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
HOXD13P35453 RNU6-949P-201ENST00000384040 107 ntBASIC0.39□□□□□ -2.35
HOXD13P35453 RNY1P6-201ENST00000384193 109 ntBASIC0.39□□□□□ -2.35
HOXD13P35453 SNORA18-201ENST00000384416 132 ntBASIC0.39□□□□□ -2.35
HOXD13P35453 MIR568-201ENST00000385036 95 ntBASIC0.39□□□□□ -2.35
HOXD13P35453 MIR518A1-201ENST00000385068 85 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms