Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HOXD12P35452 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 MIR1185-1-201ENST00000408598 86 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 MIR1302-7-201ENST00000408841 72 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 RPS3AP1-201ENST00000413190 320 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 AC090844.1-201ENST00000422019 156 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 AL158147.1-201ENST00000443970 75 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 AP003716.2-201ENST00000528260 108 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.32□□□□□ -2.2
HOXD12P35452 AC021443.1-201ENST00000604478 211 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
HOXD12P35452 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
HOXD12P35452 RNU6-396P-201ENST00000365369 105 ntBASIC1.31□□□□□ -2.2
HOXD12P35452 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.31□□□□□ -2.2
HOXD12P35452 AL137067.1-201ENST00000615933 120 ntBASIC1.31□□□□□ -2.2
HOXD12P35452 Z97988.1-201ENST00000637697 135 ntBASIC1.31□□□□□ -2.2
HOXD12P35452 RNU1-93P-201ENST00000364704 169 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 Y_RNA.280-201ENST00000364765 112 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 RNU6-959P-201ENST00000384671 107 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 SNORD38B-201ENST00000384690 67 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 RNU6-602P-201ENST00000411155 105 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 RN7SKP19-201ENST00000516016 252 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 RNU6-1234P-201ENST00000516877 103 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 SNORD38B-202ENST00000625943 69 ntBASIC1.3□□□□□ -2.2
HOXD12P35452 SNORA22.1-201ENST00000362701 134 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 Y_RNA.430-201ENST00000384081 110 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 RNA5SP144-201ENST00000410846 116 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 RNU6-893P-201ENST00000458841 100 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 RNU11-2P-201ENST00000516898 142 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 MIR4305-201ENST00000583252 102 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
HOXD12P35452 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
HOXD12P35452 Y_RNA.71-201ENST00000362892 104 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 Y_RNA.218-201ENST00000364218 104 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 Y_RNA.354-201ENST00000365448 111 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 RNU6-80P-201ENST00000384195 107 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 RNU6-910P-201ENST00000390844 107 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 POLR2J4-204ENST00000418424 324 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 RNU7-164P-201ENST00000459221 62 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 RNU6-406P-201ENST00000516470 107 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 RNU6-1061P-201ENST00000516530 99 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 IGKV1-22-201ENST00000524313 326 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.28□□□□□ -2.2
HOXD12P35452 MIR6516-201ENST00000630554 81 ntBASIC1.28□□□□□ -2.2
HOXD12P35452 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 Y_RNA.363-201ENST00000365529 113 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 MIR7-2-201ENST00000384970 110 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 Y_RNA.617-201ENST00000410920 90 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 AL022718.1-201ENST00000412004 84 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 RNU7-107P-201ENST00000459121 61 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 RNU2-35P-201ENST00000516446 142 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 MIR2115-201ENST00000516657 100 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 AC022709.1-201ENST00000615967 87 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 MIR6841-201ENST00000637129 72 ntBASIC1.27□□□□□ -2.21
HOXD12P35452 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
HOXD12P35452 MIR96-201ENST00000362288 78 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 MIR1263-201ENST00000408324 86 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 AC244023.1-201ENST00000426884 112 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 AL606753.1-201ENST00000427435 87 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.26□□□□□ -2.21
HOXD12P35452 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 RNU6-781P-201ENST00000516377 101 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 AP000753.3-201ENST00000604083 169 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 AC242498.1-201ENST00000604134 111 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 SEPT14P17-201ENST00000617978 177 ntBASIC1.26□□□□□ -2.21
HOXD12P35452 Y_RNA.171-201ENST00000363760 102 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 Y_RNA.298-201ENST00000364960 107 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 SNORD12C-201ENST00000386307 89 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 SNORD12-201ENST00000391002 90 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 SNORA75.2-201ENST00000391138 150 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 SNORA75.3-201ENST00000391231 150 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 AL512326.2-201ENST00000426359 151 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.25□□□□□ -2.21
HOXD12P35452 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 RNU7-123P-201ENST00000515911 60 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 RNY4P20-201ENST00000516678 93 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 RNA5SP480-201ENST00000516840 109 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 RNU6-1258P-201ENST00000516911 111 ntBASIC1.25□□□□□ -2.21
HOXD12P35452 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.25□□□□□ -2.21
HOXD12P35452 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
HOXD12P35452 AL157777.2-201ENST00000258070 137 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 SNORA80D-201ENST00000384488 135 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 RNU6-1117P-201ENST00000384525 104 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 Y_RNA.525-201ENST00000384570 113 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 SNORA19-201ENST00000384737 128 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 RNA5SP95-201ENST00000410319 137 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 AC004812.1-201ENST00000540773 146 ntBASIC1.24□□□□□ -2.21
HOXD12P35452 SNORD116-14-201ENST00000383894 92 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 SNORD116-17-201ENST00000383929 92 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 SNORD116-15-201ENST00000384445 92 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 Y_RNA.531-201ENST00000384589 121 ntBASIC1.23□□□□□ -2.21
HOXD12P35452 SNORD116-19-201ENST00000384729 92 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms