Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.04□□□□□ -2.4
RORAP35398 AC134503.1-201ENST00000633048 54 ntBASIC0.04□□□□□ -2.4
RORAP35398 MIR6828-201ENST00000636181 60 ntBASIC0.04□□□□□ -2.4
RORAP35398 MIR302B-201ENST00000362188 73 ntBASIC0.03□□□□□ -2.4
RORAP35398 MIR616-201ENST00000385293 97 ntBASIC0.03□□□□□ -2.4
RORAP35398 AL442067.1-201ENST00000613261 223 ntBASIC0.03□□□□□ -2.4
RORAP35398 RNU6-403P-201ENST00000363163 104 ntBASIC0.02□□□□□ -2.41
RORAP35398 Y_RNA.542-201ENST00000384641 111 ntBASIC0.02□□□□□ -2.41
RORAP35398 RNA5SP237-201ENST00000410414 113 ntBASIC0.02□□□□□ -2.41
RORAP35398 RNA5SP261-201ENST00000410536 106 ntBASIC0.02□□□□□ -2.41
RORAP35398 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.02□□□□□ -2.41
RORAP35398 SUMO1P3-201ENST00000439961 304 ntBASIC0.02□□□□□ -2.41
RORAP35398 RNU6-1143P-201ENST00000516125 104 ntBASIC0.02□□□□□ -2.41
RORAP35398 RNU6-765P-201ENST00000516916 99 ntBASIC0.02□□□□□ -2.41
RORAP35398 AC020661.2-201ENST00000560114 134 ntBASIC0.02□□□□□ -2.41
RORAP35398 Y_RNA.44-201ENST00000362676 108 ntBASIC0.01□□□□□ -2.41
RORAP35398 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
RORAP35398 Y_RNA.374-201ENST00000365606 101 ntBASIC0.01□□□□□ -2.41
RORAP35398 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
RORAP35398 RNU6-291P-201ENST00000384720 107 ntBASIC0.01□□□□□ -2.41
RORAP35398 MIR548P-201ENST00000408336 84 ntBASIC0.01□□□□□ -2.41
RORAP35398 RNU6-570P-201ENST00000517051 105 ntBASIC0.01□□□□□ -2.41
RORAP35398 RNA5SP47-201ENST00000517230 109 ntBASIC0.01□□□□□ -2.41
RORAP35398 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
RORAP35398 MIR3171-201ENST00000584270 74 ntBASIC0.01□□□□□ -2.41
RORAP35398 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
RORAP35398 AL596211.1-201ENST00000569873 2277 ntBASIC0.01□□□□□ -2.41
RORAP35398 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
RORAP35398 Y_RNA.82-201ENST00000363000 102 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.92-201ENST00000363043 102 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.235-201ENST00000364412 102 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.306-201ENST00000365015 102 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.312-201ENST00000365089 102 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.322-201ENST00000365151 102 ntBASIC0□□□□□ -2.41
RORAP35398 RNU6-949P-201ENST00000384040 107 ntBASIC0□□□□□ -2.41
RORAP35398 RNU6-381P-201ENST00000391259 108 ntBASIC0□□□□□ -2.41
RORAP35398 PCNPP3-201ENST00000393579 471 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.650-201ENST00000459002 102 ntBASIC0□□□□□ -2.41
RORAP35398 RNU7-80P-201ENST00000459562 61 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.777-201ENST00000516982 102 ntBASIC0□□□□□ -2.41
RORAP35398 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
RORAP35398 MTND5P34-201ENST00000568888 325 ntBASIC0□□□□□ -2.41
RORAP35398 AL365205.2-201ENST00000594586 68 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.771-201ENST00000598668 102 ntBASIC0□□□□□ -2.41
RORAP35398 Y_RNA.789-201ENST00000622480 102 ntBASIC0□□□□□ -2.41
RORAP35398 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
RORAP35398 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
RORAP35398 SNORA22.1-201ENST00000362701 134 ntBASIC-0.01□□□□□ -2.41
RORAP35398 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.01□□□□□ -2.41
RORAP35398 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.01□□□□□ -2.41
RORAP35398 SEPT7P4-201ENST00000437076 306 ntBASIC-0.01□□□□□ -2.41
RORAP35398 AC021613.1-201ENST00000623880 111 ntBASIC-0.01□□□□□ -2.41
RORAP35398 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.02□□□□□ -2.41
RORAP35398 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.02□□□□□ -2.41
RORAP35398 SNORD28-201ENST00000384706 75 ntBASIC-0.02□□□□□ -2.41
RORAP35398 SNORA25.16-201ENST00000516741 121 ntBASIC-0.02□□□□□ -2.41
RORAP35398 RNU6-135P-201ENST00000516769 101 ntBASIC-0.02□□□□□ -2.41
RORAP35398 AL442663.2-201ENST00000554385 511 ntBASIC-0.02□□□□□ -2.41
RORAP35398 MIR4282-201ENST00000583613 67 ntBASIC-0.02□□□□□ -2.41
RORAP35398 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
RORAP35398 U2.14-201ENST00000615943 113 ntBASIC-0.02□□□□□ -2.41
RORAP35398 AL365265.1-201ENST00000621045 234 ntBASIC-0.02□□□□□ -2.41
RORAP35398 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
RORAP35398 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.03□□□□□ -2.41
RORAP35398 RNY1P13-201ENST00000365030 105 ntBASIC-0.03□□□□□ -2.41
RORAP35398 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.03□□□□□ -2.41
RORAP35398 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.03□□□□□ -2.41
RORAP35398 SNORA72.6-201ENST00000384520 129 ntBASIC-0.03□□□□□ -2.41
RORAP35398 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.03□□□□□ -2.41
RORAP35398 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
RORAP35398 SCARNA15-202ENST00000516881 127 ntBASIC-0.03□□□□□ -2.41
RORAP35398 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.03□□□□□ -2.41
RORAP35398 MIR3152-201ENST00000579801 74 ntBASIC-0.03□□□□□ -2.41
RORAP35398 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
RORAP35398 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.04□□□□□ -2.42
RORAP35398 SNORA18-201ENST00000384416 132 ntBASIC-0.04□□□□□ -2.42
RORAP35398 RNU4-43P-201ENST00000410628 137 ntBASIC-0.04□□□□□ -2.42
RORAP35398 AC113618.1-201ENST00000416747 285 ntBASIC-0.04□□□□□ -2.42
RORAP35398 RNA5SP227-201ENST00000516184 113 ntBASIC-0.04□□□□□ -2.42
RORAP35398 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.04□□□□□ -2.42
RORAP35398 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.04□□□□□ -2.42
RORAP35398 RNU1-29P-201ENST00000606574 126 ntBASIC-0.04□□□□□ -2.42
RORAP35398 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.05□□□□□ -2.42
RORAP35398 RNU6-978P-201ENST00000364371 103 ntBASIC-0.05□□□□□ -2.42
RORAP35398 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.05□□□□□ -2.42
RORAP35398 RNU6-535P-201ENST00000384722 107 ntBASIC-0.05□□□□□ -2.42
RORAP35398 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
RORAP35398 RNU6-985P-201ENST00000410182 104 ntBASIC-0.05□□□□□ -2.42
RORAP35398 TRBVB-201ENST00000477100 408 ntBASIC-0.05□□□□□ -2.42
RORAP35398 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.05□□□□□ -2.42
RORAP35398 MIR4639-201ENST00000584938 69 ntBASIC-0.05□□□□□ -2.42
RORAP35398 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.05□□□□□ -2.42
RORAP35398 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
RORAP35398 AC091304.10-201ENST00000641554 121 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms