Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 AL117187.1-201ENST00000555482 181 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 MIR3678-201ENST00000578455 94 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 MIR4744-201ENST00000581563 82 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 AC021613.1-201ENST00000623880 111 ntBASIC0.23□□□□□ -2.37
CTNNA1P35221 AL596211.1-201ENST00000569873 2277 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 MIR624-201ENST00000385217 97 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 MIR548H3-201ENST00000408771 118 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 RPL39P25-201ENST00000449384 154 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 SCARNA15-202ENST00000516881 127 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 AC141846.1-201ENST00000568348 142 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 MIR4643-201ENST00000577473 78 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
CTNNA1P35221 SNORA22.1-201ENST00000362701 134 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 Y_RNA.121-201ENST00000363309 113 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 RNU6-238P-201ENST00000363313 106 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 Y_RNA.145-201ENST00000363527 102 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 SNORD114-23-201ENST00000363536 72 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 Y_RNA.292-201ENST00000364904 97 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 RNU6-597P-201ENST00000365620 102 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 RNA5SP127-201ENST00000411051 133 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 RNU6-135P-201ENST00000516769 101 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 AC133485.4-201ENST00000561835 220 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 MIR378D2-201ENST00000580636 98 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 MIR6082-201ENST00000613604 109 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 AC022709.1-201ENST00000615967 87 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 MIR6515-201ENST00000619843 57 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
CTNNA1P35221 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
CTNNA1P35221 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.76-201ENST00000362931 109 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.396-201ENST00000383949 103 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 RNU6-949P-201ENST00000384040 107 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.515-201ENST00000384535 112 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.562-201ENST00000384695 113 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 MIR598-201ENST00000384868 97 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 U8.15-201ENST00000390947 134 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 RNU6-578P-201ENST00000390980 103 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.588-201ENST00000391254 102 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 AC096949.1-201ENST00000412047 152 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 RNU6-893P-201ENST00000458841 100 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 RNU7-70P-201ENST00000516941 66 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.2□□□□□ -2.38
CTNNA1P35221 Y_RNA.174-201ENST00000363781 105 ntBASIC0.19□□□□□ -2.38
CTNNA1P35221 SEPT7P4-201ENST00000437076 306 ntBASIC0.19□□□□□ -2.38
CTNNA1P35221 AL121914.1-201ENST00000450188 156 ntBASIC0.19□□□□□ -2.38
CTNNA1P35221 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
CTNNA1P35221 SNORA62.5-201ENST00000516634 120 ntBASIC0.19□□□□□ -2.38
CTNNA1P35221 Y_RNA.13-201ENST00000362403 112 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 SNORA36.1-201ENST00000363424 132 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 RNU6-1099P-201ENST00000363533 107 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 Y_RNA.277-201ENST00000364754 102 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 MIR606-201ENST00000384851 96 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 SNORD58.1-201ENST00000391313 66 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 AC010487.4-201ENST00000637027 61 ntBASIC0.18□□□□□ -2.38
CTNNA1P35221 SNORA63-201ENST00000363450 132 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 RNY4P28-201ENST00000365281 93 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 RNU6-643P-201ENST00000384018 107 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 MIR613-201ENST00000385248 95 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 RNU2-38P-201ENST00000410856 79 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.617-201ENST00000410920 90 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 RNU6-1086P-201ENST00000410930 100 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 RNU5E-9P-201ENST00000411164 104 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 MTND1P19-201ENST00000511780 315 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.812-201ENST00000610788 101 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.784-201ENST00000613803 101 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.787-201ENST00000616522 101 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.780-201ENST00000617336 101 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.801-201ENST00000619005 101 ntBASIC0.17□□□□□ -2.38
CTNNA1P35221 Y_RNA.54-201ENST00000362766 105 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 Y_RNA.149-201ENST00000363558 117 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 Y_RNA.288-201ENST00000364854 92 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.16□□□□□ -2.38
CTNNA1P35221 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 SNORD127-201ENST00000458892 86 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 RNU6-1149P-201ENST00000516810 97 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 MIR4491-201ENST00000581087 68 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 MIR6828-201ENST00000636181 60 ntBASIC0.16□□□□□ -2.38
CTNNA1P35221 Y_RNA.32-201ENST00000362589 110 ntBASIC0.15□□□□□ -2.39
CTNNA1P35221 SNORA18-201ENST00000384416 132 ntBASIC0.15□□□□□ -2.39
CTNNA1P35221 RNU6-738P-201ENST00000384531 106 ntBASIC0.15□□□□□ -2.39
CTNNA1P35221 Y_RNA.556-201ENST00000384677 113 ntBASIC0.15□□□□□ -2.39
CTNNA1P35221 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
CTNNA1P35221 RNU6-1194P-201ENST00000516208 104 ntBASIC0.15□□□□□ -2.39
CTNNA1P35221 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
CTNNA1P35221 Y_RNA.47-201ENST00000362697 108 ntBASIC0.14□□□□□ -2.39
CTNNA1P35221 RNU6-403P-201ENST00000363163 104 ntBASIC0.14□□□□□ -2.39
CTNNA1P35221 RNY1-201ENST00000364228 113 ntBASIC0.14□□□□□ -2.39
CTNNA1P35221 RNY1P13-201ENST00000365030 105 ntBASIC0.14□□□□□ -2.39
CTNNA1P35221 Y_RNA.308-201ENST00000365043 101 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms