Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 RNU6-1056P-201ENST00000383996 107 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SLC6A4P31645 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 POLR2J4-204ENST00000418424 324 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 RNU7-45P-201ENST00000459460 63 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 MIR548AO-201ENST00000579992 96 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 HSPE1P19-201ENST00000603327 295 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 AL670379.3-201ENST00000605040 251 ntBASIC1.55□□□□□ -2.16
SLC6A4P31645 Y_RNA.353-201ENST00000365440 108 ntBASIC1.54□□□□□ -2.16
SLC6A4P31645 SNORD38B-201ENST00000384690 67 ntBASIC1.54□□□□□ -2.16
SLC6A4P31645 MIR1276-201ENST00000408707 83 ntBASIC1.54□□□□□ -2.16
SLC6A4P31645 RNU7-123P-201ENST00000515911 60 ntBASIC1.54□□□□□ -2.16
SLC6A4P31645 SNORD38B-202ENST00000625943 69 ntBASIC1.54□□□□□ -2.16
SLC6A4P31645 SNORD115-2-201ENST00000362842 82 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 SNORD115-20-201ENST00000365099 82 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 RNU6-396P-201ENST00000365369 105 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 Y_RNA.525-201ENST00000384570 113 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 Y_RNA.630-201ENST00000411370 108 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.53□□□□□ -2.16
SLC6A4P31645 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 RNU7-113P-201ENST00000459273 62 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 RNU2-35P-201ENST00000516446 142 ntBASIC1.53□□□□□ -2.16
SLC6A4P31645 Y_RNA.531-201ENST00000384589 121 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 MIR548A3-201ENST00000385297 97 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 RNU6-1064P-201ENST00000410626 104 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 RNU6-1190P-201ENST00000410811 104 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC6A4P31645 AC113410.1-201ENST00000505029 247 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 RN7SKP88-201ENST00000516847 250 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 AC004812.1-201ENST00000540773 146 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 7SK.8-201ENST00000612110 250 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 7SK.11-201ENST00000615477 250 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 7SK.13-201ENST00000622040 250 ntBASIC1.52□□□□□ -2.17
SLC6A4P31645 RNU6-1290P-201ENST00000362957 109 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 RNY4P6-201ENST00000363667 96 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 RNU6-1144P-201ENST00000384247 104 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 RNU6-476P-201ENST00000384726 107 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 RNU6-1054P-201ENST00000411293 104 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.51□□□□□ -2.17
SLC6A4P31645 HMGN1P33-201ENST00000432945 451 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 MIR2115-201ENST00000516657 100 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 MIR3163-201ENST00000581592 73 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
SLC6A4P31645 RNA5SP264-201ENST00000363115 107 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 MT-TN-201ENST00000387400 73 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
SLC6A4P31645 RNU6-735P-201ENST00000410612 107 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 RNU6-602P-201ENST00000411155 105 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 Y_RNA.649-201ENST00000459077 103 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 SNORD33.1-201ENST00000516213 88 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 RNU6-165P-201ENST00000517170 99 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.5□□□□□ -2.17
SLC6A4P31645 SNORA4-201ENST00000584302 138 ntBASIC1.5□□□□□ -2.17
SLC6A4P31645 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SLC6A4P31645 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 RPS23P4-201ENST00000487908 423 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 MIR8065-201ENST00000620577 100 ntBASIC1.49□□□□□ -2.17
SLC6A4P31645 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
SLC6A4P31645 AL512326.2-201ENST00000426359 151 ntBASIC1.48□□□□□ -2.17
SLC6A4P31645 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
SLC6A4P31645 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
SLC6A4P31645 MTND5P34-201ENST00000568888 325 ntBASIC1.48□□□□□ -2.17
SLC6A4P31645 AP000753.3-201ENST00000604083 169 ntBASIC1.48□□□□□ -2.17
SLC6A4P31645 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SLC6A4P31645 SNORA25.3-201ENST00000363205 127 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 Y_RNA.171-201ENST00000363760 102 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 RNU6-880P-201ENST00000384526 107 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 MIR1302-7-201ENST00000408841 72 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 RNU4-69P-201ENST00000410677 143 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 RNA5SP33-201ENST00000516687 98 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 PRELID3BP2-201ENST00000605362 201 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.47□□□□□ -2.17
SLC6A4P31645 ZNF209P-201ENST00000593450 2304 ntBASIC1.47□□□□□ -2.17
SLC6A4P31645 MIR377-201ENST00000362145 69 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 RNU6-42P-201ENST00000384165 107 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 SNORD116-21-201ENST00000384507 92 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 SNORD77B-201ENST00000391112 67 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 snoU13.25-201ENST00000458945 104 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 MIR4679-2-201ENST00000578358 77 ntBASIC1.46□□□□□ -2.18
SLC6A4P31645 MIR1185-1-201ENST00000408598 86 ntBASIC1.45□□□□□ -2.18
SLC6A4P31645 RNU6-613P-201ENST00000410412 108 ntBASIC1.45□□□□□ -2.18
SLC6A4P31645 AC090844.1-201ENST00000422019 156 ntBASIC1.45□□□□□ -2.18
SLC6A4P31645 RNU6-412P-201ENST00000516434 106 ntBASIC1.45□□□□□ -2.18
SLC6A4P31645 RNU6-1258P-201ENST00000516911 111 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms