Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU1-78P-201ENST00000391248 165 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 RPL39P25-201ENST00000449384 154 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 snoU13.25-201ENST00000458945 104 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 RPL30P7-201ENST00000479312 323 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 MIR5009-201ENST00000578736 100 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 MIR4781-201ENST00000585250 76 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 AL162726.3-218ENST00000636401 95 ntBASIC1.83□□□□□ -2.12
HOXC12P31275 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC12P31275 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC12P31275 RNU6-396P-201ENST00000365369 105 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 RNU6-147P-201ENST00000383983 107 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 RNU6-816P-201ENST00000390914 107 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 RNU6-1268P-201ENST00000391214 107 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 RNU6-1239P-201ENST00000391310 107 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 MIR1302-5-201ENST00000408164 150 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 MIR1302-7-201ENST00000408841 72 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 AL031737.1-201ENST00000450125 223 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
HOXC12P31275 SNORD115-19-201ENST00000363098 82 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 SNORD115-18-201ENST00000363293 82 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 SNORD115-17-201ENST00000364612 82 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 RNA5SP37-201ENST00000365420 130 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 RNU6-616P-201ENST00000384353 107 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 AC244023.1-201ENST00000426884 112 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 MIR4422-201ENST00000581938 83 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 AC242498.1-201ENST00000604134 111 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 MIR1255B1-201ENST00000636325 63 ntBASIC1.81□□□□□ -2.12
HOXC12P31275 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.81□□□□□ -2.12
HOXC12P31275 MIR450A1-201ENST00000362262 91 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 Y_RNA.163-201ENST00000363702 113 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 Y_RNA.323-201ENST00000365157 109 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 Y_RNA.507-201ENST00000384500 99 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 MIR1912-201ENST00000410389 80 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 RNU6-554P-201ENST00000410466 106 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 MIR1270-201ENST00000459320 83 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 RNA5SP182-201ENST00000516064 82 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 RNU6-94P-201ENST00000607728 107 ntBASIC1.8□□□□□ -2.12
HOXC12P31275 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HOXC12P31275 RNA5SP264-201ENST00000363115 107 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HOXC12P31275 RNU6-1086P-201ENST00000410930 100 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 AC108667.1-201ENST00000428618 249 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 AC025033.1-201ENST00000463883 194 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 RNU6-165P-201ENST00000517170 99 ntBASIC1.79□□□□□ -2.12
HOXC12P31275 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC12P31275 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC12P31275 MIR103A2-201ENST00000362154 78 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 Y_RNA.155-201ENST00000363632 101 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 RNA5SP237-201ENST00000410414 113 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 AC104435.1-201ENST00000483483 166 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 RNU7-79P-201ENST00000516082 62 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 FAM71BP1-201ENST00000604431 523 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 snoU13.31-201ENST00000607291 104 ntBASIC1.78□□□□□ -2.12
HOXC12P31275 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HOXC12P31275 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
HOXC12P31275 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HOXC12P31275 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXC12P31275 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.77□□□□□ -2.13
HOXC12P31275 RNU4-67P-201ENST00000364569 141 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 SNORA51.5-201ENST00000384126 131 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 MIR1185-1-201ENST00000408598 86 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 RPS27P16-201ENST00000425758 201 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 MIR2115-201ENST00000516657 100 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 RNU7-35P-201ENST00000517174 62 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 MIR3613-201ENST00000579844 87 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 AP000753.3-201ENST00000604083 169 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
HOXC12P31275 RNU6-363P-201ENST00000362895 105 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 RNU6-756P-201ENST00000383997 107 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 RNU6-409P-201ENST00000384114 104 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 SNORA7.5-201ENST00000410672 110 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC12P31275 AC245517.4-201ENST00000448601 281 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 RNU6-970P-201ENST00000516312 107 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 RN7SKP88-201ENST00000516847 250 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 AP003716.2-201ENST00000528260 108 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 7SK.8-201ENST00000612110 250 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 7SK.11-201ENST00000615477 250 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 7SK.13-201ENST00000622040 250 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 MIR6516-201ENST00000630554 81 ntBASIC1.76□□□□□ -2.13
HOXC12P31275 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
HOXC12P31275 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
HOXC12P31275 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
HOXC12P31275 RNU6-205P-201ENST00000390858 107 ntBASIC1.75□□□□□ -2.13
HOXC12P31275 RNU6-733P-201ENST00000410759 104 ntBASIC1.75□□□□□ -2.13
HOXC12P31275 snoU13.2-201ENST00000459201 104 ntBASIC1.75□□□□□ -2.13
HOXC12P31275 RNU11-2P-201ENST00000516898 142 ntBASIC1.75□□□□□ -2.13
HOXC12P31275 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC12P31275 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC12P31275 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 RNU6-1113P-201ENST00000384348 107 ntBASIC1.74□□□□□ -2.13
HOXC12P31275 Y_RNA.508-201ENST00000384502 114 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms