Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RNU6-756P-201ENST00000383997 107 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 RNU6-13P-201ENST00000384248 107 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 RNU6-12P-201ENST00000384604 107 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 RNU6-41P-201ENST00000384741 107 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LMNB1P20700 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 snoU13.16-201ENST00000459350 104 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 MIR3152-201ENST00000579801 74 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 MIR4713-201ENST00000582691 75 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 AC103810.8-201ENST00000607347 118 ntBASIC2.24□□□□□ -2.05
LMNB1P20700 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LMNB1P20700 RNU6-766P-201ENST00000362478 107 ntBASIC2.23□□□□□ -2.05
LMNB1P20700 RNA5SP160-201ENST00000364866 120 ntBASIC2.23□□□□□ -2.05
LMNB1P20700 RNU6-392P-201ENST00000364926 101 ntBASIC2.23□□□□□ -2.05
LMNB1P20700 SNORA51.5-201ENST00000384126 131 ntBASIC2.23□□□□□ -2.05
LMNB1P20700 Y_RNA.540-201ENST00000384638 111 ntBASIC2.23□□□□□ -2.05
LMNB1P20700 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LMNB1P20700 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.23□□□□□ -2.05
LMNB1P20700 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.23□□□□□ -2.05
LMNB1P20700 AL162726.3-218ENST00000636401 95 ntBASIC2.23□□□□□ -2.05
LMNB1P20700 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
LMNB1P20700 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMNB1P20700 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMNB1P20700 SNORD115-19-201ENST00000363098 82 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 SNORD115-18-201ENST00000363293 82 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 SNORD115-17-201ENST00000364612 82 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 SNORA1.1-201ENST00000364671 133 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 MIR1302-5-201ENST00000408164 150 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 RNU4-69P-201ENST00000410677 143 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 RNA5SP33-201ENST00000516687 98 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 RNU6-537P-201ENST00000517277 103 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 MIR3192-201ENST00000584920 77 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 MIR502-201ENST00000606349 86 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 MIR8065-201ENST00000620577 100 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 AP000553.5-201ENST00000641933 54 ntBASIC2.22□□□□□ -2.05
LMNB1P20700 RNU6-1067P-201ENST00000384752 107 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 RNU6-816P-201ENST00000390914 107 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 RNU6-1268P-201ENST00000391214 107 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 RNU6-1239P-201ENST00000391310 107 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 AL451046.2-201ENST00000403074 277 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 AC005908.1-201ENST00000468701 347 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 SNORD111.1-201ENST00000516421 86 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 RNA5SP170-201ENST00000517150 101 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 MIR4251-201ENST00000635819 61 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 Z97988.1-201ENST00000637697 135 ntBASIC2.21□□□□□ -2.06
LMNB1P20700 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LMNB1P20700 Y_RNA.309-201ENST00000365046 111 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 SNORA32-201ENST00000384072 121 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 RNU6-342P-201ENST00000384521 104 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 MIR590-201ENST00000385008 97 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 RNA5SP261-201ENST00000410536 106 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 RNU6-602P-201ENST00000411155 105 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 RPS3AP1-201ENST00000413190 320 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 AL353813.1-201ENST00000440700 253 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 snoU13.25-201ENST00000458945 104 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 RNU6-322P-201ENST00000516010 103 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 AL096861.1-201ENST00000610899 123 ntBASIC2.2□□□□□ -2.06
LMNB1P20700 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 Y_RNA.348-201ENST00000365403 103 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 AC009474.2-201ENST00000451383 136 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 RNU6-893P-201ENST00000458841 100 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 RNU6-109P-201ENST00000516364 107 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 RNU6-184P-201ENST00000516514 107 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 MIR8074-201ENST00000615081 81 ntBASIC2.19□□□□□ -2.06
LMNB1P20700 AP000648.3-201ENST00000623539 4507 ntBASIC2.18□□□□□ -2.06
LMNB1P20700 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LMNB1P20700 RNU6-616P-201ENST00000384353 107 ntBASIC2.18□□□□□ -2.06
LMNB1P20700 RNU6-905P-201ENST00000384434 107 ntBASIC2.18□□□□□ -2.06
LMNB1P20700 RPL39P25-201ENST00000449384 154 ntBASIC2.18□□□□□ -2.06
LMNB1P20700 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LMNB1P20700 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.17□□□□□ -2.06
LMNB1P20700 MIR302D-201ENST00000362275 68 ntBASIC2.17□□□□□ -2.06
LMNB1P20700 RNU6-640P-201ENST00000363693 105 ntBASIC2.17□□□□□ -2.06
LMNB1P20700 Y_RNA.299-201ENST00000364973 94 ntBASIC2.17□□□□□ -2.06
LMNB1P20700 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.17□□□□□ -2.06
LMNB1P20700 Y_RNA.677-201ENST00000516401 85 ntBASIC2.17□□□□□ -2.06
LMNB1P20700 MIR1302-7-201ENST00000408841 72 ntBASIC2.16□□□□□ -2.06
LMNB1P20700 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.16□□□□□ -2.06
LMNB1P20700 AC141557.1-201ENST00000540982 400 ntBASIC2.16□□□□□ -2.06
LMNB1P20700 AP001318.4-201ENST00000616637 121 ntBASIC2.16□□□□□ -2.06
LMNB1P20700 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
LMNB1P20700 RNU6-363P-201ENST00000362895 105 ntBASIC2.15□□□□□ -2.07
LMNB1P20700 Y_RNA.191-201ENST00000363972 113 ntBASIC2.15□□□□□ -2.07
LMNB1P20700 MIR605-201ENST00000385078 83 ntBASIC2.15□□□□□ -2.07
LMNB1P20700 AC245047.7-201ENST00000440265 293 ntBASIC2.15□□□□□ -2.07
LMNB1P20700 RNU6-904P-201ENST00000516206 101 ntBASIC2.15□□□□□ -2.07
LMNB1P20700 Y_RNA.43-201ENST00000362670 111 ntBASIC2.14□□□□□ -2.07
LMNB1P20700 RNU4-67P-201ENST00000364569 141 ntBASIC2.14□□□□□ -2.07
LMNB1P20700 MIR1912-201ENST00000410389 80 ntBASIC2.14□□□□□ -2.07
LMNB1P20700 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
LMNB1P20700 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
LMNB1P20700 MIR8063-201ENST00000621930 81 ntBASIC2.14□□□□□ -2.07
LMNB1P20700 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.13□□□□□ -2.07
LMNB1P20700 RNU6-1255P-201ENST00000363434 112 ntBASIC2.13□□□□□ -2.07
LMNB1P20700 RNU6-42P-201ENST00000384165 107 ntBASIC2.13□□□□□ -2.07
LMNB1P20700 SNORA18-201ENST00000384416 132 ntBASIC2.13□□□□□ -2.07
LMNB1P20700 RNU6-679P-201ENST00000391003 106 ntBASIC2.13□□□□□ -2.07
LMNB1P20700 RNU6-1307P-201ENST00000391012 103 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms