Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RXRAP19793 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.18□□□□□ -2.22
RXRAP19793 Y_RNA.114-201ENST00000363265 113 ntBASIC1.18□□□□□ -2.22
RXRAP19793 Y_RNA.218-201ENST00000364218 104 ntBASIC1.18□□□□□ -2.22
RXRAP19793 Y_RNA.454-201ENST00000384224 113 ntBASIC1.18□□□□□ -2.22
RXRAP19793 RNU6-1117P-201ENST00000384525 104 ntBASIC1.18□□□□□ -2.22
RXRAP19793 RNU6-613P-201ENST00000410412 108 ntBASIC1.18□□□□□ -2.22
RXRAP19793 RNU7-73P-201ENST00000458743 63 ntBASIC1.18□□□□□ -2.22
RXRAP19793 MIR3121-201ENST00000579680 77 ntBASIC1.18□□□□□ -2.22
RXRAP19793 MIR548AO-201ENST00000579992 96 ntBASIC1.18□□□□□ -2.22
RXRAP19793 AL596211.1-201ENST00000569873 2277 ntBASIC1.18□□□□□ -2.22
RXRAP19793 RNU6-235P-201ENST00000362644 107 ntBASIC1.17□□□□□ -2.22
RXRAP19793 Y_RNA.71-201ENST00000362892 104 ntBASIC1.17□□□□□ -2.22
RXRAP19793 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
RXRAP19793 Y_RNA.280-201ENST00000364765 112 ntBASIC1.17□□□□□ -2.22
RXRAP19793 MIR200A-201ENST00000384875 90 ntBASIC1.17□□□□□ -2.22
RXRAP19793 MIR2115-201ENST00000516657 100 ntBASIC1.17□□□□□ -2.22
RXRAP19793 RNU6-1234P-201ENST00000516877 103 ntBASIC1.17□□□□□ -2.22
RXRAP19793 MIR4452-201ENST00000583004 71 ntBASIC1.17□□□□□ -2.22
RXRAP19793 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.17□□□□□ -2.22
RXRAP19793 MIR6516-201ENST00000630554 81 ntBASIC1.17□□□□□ -2.22
RXRAP19793 MIR302B-201ENST00000362188 73 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU6-396P-201ENST00000365369 105 ntBASIC1.16□□□□□ -2.22
RXRAP19793 SNORD116-14-201ENST00000383894 92 ntBASIC1.16□□□□□ -2.22
RXRAP19793 SNORD116-17-201ENST00000383929 92 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU6-80P-201ENST00000384195 107 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU6-22P-201ENST00000384355 107 ntBASIC1.16□□□□□ -2.22
RXRAP19793 SNORD116-15-201ENST00000384445 92 ntBASIC1.16□□□□□ -2.22
RXRAP19793 SNORD116-19-201ENST00000384729 92 ntBASIC1.16□□□□□ -2.22
RXRAP19793 MT-TN-201ENST00000387400 73 ntBASIC1.16□□□□□ -2.22
RXRAP19793 AL035398.1-201ENST00000430869 322 ntBASIC1.16□□□□□ -2.22
RXRAP19793 AL158147.1-201ENST00000443970 75 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU7-67P-201ENST00000459003 62 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU2-11P-201ENST00000459191 187 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU6-113P-201ENST00000516653 101 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU7-53P-201ENST00000516705 60 ntBASIC1.16□□□□□ -2.22
RXRAP19793 RNU6-958P-201ENST00000516995 106 ntBASIC1.16□□□□□ -2.22
RXRAP19793 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.16□□□□□ -2.22
RXRAP19793 AL365222.1-201ENST00000614661 98 ntBASIC1.16□□□□□ -2.22
RXRAP19793 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
RXRAP19793 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RXRAP19793 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNU6-647P-201ENST00000364243 107 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNU6-690P-201ENST00000365242 106 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNY1P6-201ENST00000384193 109 ntBASIC1.15□□□□□ -2.23
RXRAP19793 MIR1276-201ENST00000408707 83 ntBASIC1.15□□□□□ -2.23
RXRAP19793 AC008267.6-201ENST00000441664 139 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNU7-107P-201ENST00000459121 61 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNU6-240P-201ENST00000516098 97 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNU6-1333P-201ENST00000516162 93 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNU6-62P-201ENST00000516526 102 ntBASIC1.15□□□□□ -2.23
RXRAP19793 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
RXRAP19793 AC108081.1-201ENST00000604358 221 ntBASIC1.15□□□□□ -2.23
RXRAP19793 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
RXRAP19793 RNU6-349P-201ENST00000362402 107 ntBASIC1.14□□□□□ -2.23
RXRAP19793 Y_RNA.127-201ENST00000363386 109 ntBASIC1.14□□□□□ -2.23
RXRAP19793 RNU4-16P-201ENST00000364737 141 ntBASIC1.14□□□□□ -2.23
RXRAP19793 Y_RNA.330-201ENST00000365230 109 ntBASIC1.14□□□□□ -2.23
RXRAP19793 RNU6-772P-201ENST00000516042 105 ntBASIC1.14□□□□□ -2.23
RXRAP19793 RNU6-479P-201ENST00000516348 105 ntBASIC1.14□□□□□ -2.23
RXRAP19793 AC036111.3-201ENST00000526389 112 ntBASIC1.14□□□□□ -2.23
RXRAP19793 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
RXRAP19793 AC106800.4-201ENST00000614905 153 ntBASIC1.14□□□□□ -2.23
RXRAP19793 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
RXRAP19793 MIR377-201ENST00000362145 69 ntBASIC1.13□□□□□ -2.23
RXRAP19793 Y_RNA.261-201ENST00000364631 102 ntBASIC1.13□□□□□ -2.23
RXRAP19793 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
RXRAP19793 Y_RNA.366-201ENST00000365540 102 ntBASIC1.13□□□□□ -2.23
RXRAP19793 Y_RNA.525-201ENST00000384570 113 ntBASIC1.13□□□□□ -2.23
RXRAP19793 RNU6-1168P-201ENST00000390831 104 ntBASIC1.13□□□□□ -2.23
RXRAP19793 RNU6-913P-201ENST00000390913 95 ntBASIC1.13□□□□□ -2.23
RXRAP19793 RNU2-51P-201ENST00000410708 197 ntBASIC1.13□□□□□ -2.23
RXRAP19793 RNU7-45P-201ENST00000459460 63 ntBASIC1.13□□□□□ -2.23
RXRAP19793 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
RXRAP19793 RNU6-313P-201ENST00000516317 112 ntBASIC1.13□□□□□ -2.23
RXRAP19793 RNU6-1061P-201ENST00000516530 99 ntBASIC1.13□□□□□ -2.23
RXRAP19793 AC133485.4-201ENST00000561835 220 ntBASIC1.13□□□□□ -2.23
RXRAP19793 AC138907.4-201ENST00000570107 226 ntBASIC1.13□□□□□ -2.23
RXRAP19793 MIR8055-201ENST00000610739 97 ntBASIC1.13□□□□□ -2.23
RXRAP19793 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
RXRAP19793 RNU6-1154P-201ENST00000391001 104 ntBASIC1.12□□□□□ -2.23
RXRAP19793 SNORD111-201ENST00000408139 94 ntBASIC1.12□□□□□ -2.23
RXRAP19793 MIR548I2-201ENST00000408348 149 ntBASIC1.12□□□□□ -2.23
RXRAP19793 RNU6-1190P-201ENST00000410811 104 ntBASIC1.12□□□□□ -2.23
RXRAP19793 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
RXRAP19793 RNU6-659P-201ENST00000516454 104 ntBASIC1.12□□□□□ -2.23
RXRAP19793 AL020996.3-201ENST00000606617 222 ntBASIC1.12□□□□□ -2.23
RXRAP19793 AL137067.1-201ENST00000615933 120 ntBASIC1.12□□□□□ -2.23
RXRAP19793 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
RXRAP19793 AC021613.1-201ENST00000623880 111 ntBASIC1.12□□□□□ -2.23
RXRAP19793 Z97988.1-201ENST00000637697 135 ntBASIC1.12□□□□□ -2.23
RXRAP19793 Y_RNA.168-201ENST00000363740 102 ntBASIC1.11□□□□□ -2.23
RXRAP19793 RNU6-654P-201ENST00000364373 107 ntBASIC1.11□□□□□ -2.23
RXRAP19793 SNORD113.3-201ENST00000364630 78 ntBASIC1.11□□□□□ -2.23
RXRAP19793 Y_RNA.291-201ENST00000364886 113 ntBASIC1.11□□□□□ -2.23
RXRAP19793 RNU6-580P-201ENST00000365159 107 ntBASIC1.11□□□□□ -2.23
RXRAP19793 RNU6-1081P-201ENST00000384537 107 ntBASIC1.11□□□□□ -2.23
RXRAP19793 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
RXRAP19793 Y_RNA.617-201ENST00000410920 90 ntBASIC1.11□□□□□ -2.23
RXRAP19793 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms