Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
XRCC1P18887 RNU6-1099P-201ENST00000363533 107 ntBASIC0.22□□□□□ -2.37
XRCC1P18887 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
XRCC1P18887 RNU6-651P-201ENST00000411040 105 ntBASIC0.22□□□□□ -2.37
XRCC1P18887 RNU6-893P-201ENST00000458841 100 ntBASIC0.22□□□□□ -2.37
XRCC1P18887 RNU7-70P-201ENST00000516941 66 ntBASIC0.22□□□□□ -2.37
XRCC1P18887 AL442663.2-201ENST00000554385 511 ntBASIC0.22□□□□□ -2.37
XRCC1P18887 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
XRCC1P18887 MIR103A1-201ENST00000362165 78 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 Y_RNA.42-201ENST00000362660 108 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 RNU7-45P-201ENST00000459460 63 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 RNU6-469P-201ENST00000516253 101 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 RNU6-635P-201ENST00000516651 102 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 MIR8066-201ENST00000617280 78 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 MIR376A2-201ENST00000636782 80 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
XRCC1P18887 AL596211.1-201ENST00000569873 2277 ntBASIC0.21□□□□□ -2.38
XRCC1P18887 Y_RNA.352-201ENST00000365439 102 ntBASIC0.2□□□□□ -2.38
XRCC1P18887 Y_RNA.416-201ENST00000384014 113 ntBASIC0.2□□□□□ -2.38
XRCC1P18887 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
XRCC1P18887 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.2□□□□□ -2.38
XRCC1P18887 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.2□□□□□ -2.38
XRCC1P18887 SNORD116-25-201ENST00000516517 92 ntBASIC0.2□□□□□ -2.38
XRCC1P18887 MIR8087-201ENST00000612745 78 ntBASIC0.2□□□□□ -2.38
XRCC1P18887 RNU6-716P-201ENST00000365621 103 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 Y_RNA.515-201ENST00000384535 112 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 AL358176.2-201ENST00000425769 204 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 RNU6-135P-201ENST00000516769 101 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 RNU6-765P-201ENST00000516916 99 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 MIR4744-201ENST00000581563 82 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
XRCC1P18887 Y_RNA.174-201ENST00000363781 105 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 Y_RNA.461-201ENST00000384263 103 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 AL512326.2-201ENST00000426359 151 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 RNU6-561P-201ENST00000516222 102 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 Y_RNA.720-201ENST00000517166 92 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 AC141846.1-201ENST00000568348 142 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 AC006504.6-201ENST00000590142 199 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 AL442067.1-201ENST00000613261 223 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 MIR6082-201ENST00000613604 109 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 AC021613.1-201ENST00000623880 111 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 MIR6841-201ENST00000637129 72 ntBASIC0.18□□□□□ -2.38
XRCC1P18887 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 SNORA22.1-201ENST00000362701 134 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 RNA5SP62-201ENST00000363457 110 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 Y_RNA.258-201ENST00000364613 105 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 MT-TW-201ENST00000387382 68 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 RNU5E-9P-201ENST00000411164 104 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 SEPT7P4-201ENST00000437076 306 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 AL121914.1-201ENST00000450188 156 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 AC133485.4-201ENST00000561835 220 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 MIR378D2-201ENST00000580636 98 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
XRCC1P18887 RNU6-238P-201ENST00000363313 106 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 Y_RNA.483-201ENST00000384380 101 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 Y_RNA.512-201ENST00000384518 102 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 Y_RNA.574-201ENST00000384766 95 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 U8.15-201ENST00000390947 134 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 SNORA25.18-201ENST00000607153 114 ntBASIC0.16□□□□□ -2.38
XRCC1P18887 Y_RNA.13-201ENST00000362403 112 ntBASIC0.15□□□□□ -2.39
XRCC1P18887 RNU6-403P-201ENST00000363163 104 ntBASIC0.15□□□□□ -2.39
XRCC1P18887 RNU6-949P-201ENST00000384040 107 ntBASIC0.15□□□□□ -2.39
XRCC1P18887 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
XRCC1P18887 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
XRCC1P18887 RNA5SP127-201ENST00000411051 133 ntBASIC0.15□□□□□ -2.39
XRCC1P18887 Y_RNA.85-201ENST00000363014 111 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 Y_RNA.115-201ENST00000363272 98 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 Y_RNA.121-201ENST00000363309 113 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 RNU6-978P-201ENST00000364371 103 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 Y_RNA.292-201ENST00000364904 97 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 MIR624-201ENST00000385217 97 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 RNU6-578P-201ENST00000390980 103 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 Y_RNA.588-201ENST00000391254 102 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 RNU6-1086P-201ENST00000410930 100 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 MIR4491-201ENST00000581087 68 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
XRCC1P18887 RNA5SP325-201ENST00000363756 130 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 RNU4-67P-201ENST00000364569 141 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 RNU6-597P-201ENST00000365620 102 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 RNU6-1160P-201ENST00000384546 104 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 MIR548H3-201ENST00000408771 118 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 MIR1197-201ENST00000408818 88 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 MTATP8P1-201ENST00000467115 207 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 AC112693.2-201ENST00000556538 232 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 AC011921.3-201ENST00000605540 361 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
XRCC1P18887 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
XRCC1P18887 RNU6-472P-201ENST00000384299 107 ntBASIC0.12□□□□□ -2.39
XRCC1P18887 MIR644A-201ENST00000385262 94 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms