Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR8065-201ENST00000620577 100 ntBASIC2.33□□□□□ -2.04
LIG1P18858 Y_RNA.95-201ENST00000363079 95 ntBASIC2.32□□□□□ -2.04
LIG1P18858 RNU6-1134P-201ENST00000365156 101 ntBASIC2.32□□□□□ -2.04
LIG1P18858 RNU6-203P-201ENST00000384038 104 ntBASIC2.32□□□□□ -2.04
LIG1P18858 RNU6-1152P-201ENST00000384576 107 ntBASIC2.32□□□□□ -2.04
LIG1P18858 MRPL35P3-201ENST00000421557 364 ntBASIC2.32□□□□□ -2.04
LIG1P18858 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
LIG1P18858 AC096720.1-201ENST00000604441 183 ntBASIC2.32□□□□□ -2.04
LIG1P18858 U7.3-201ENST00000616123 62 ntBASIC2.32□□□□□ -2.04
LIG1P18858 AL512310.12-203ENST00000640543 90 ntBASIC2.32□□□□□ -2.04
LIG1P18858 AC091304.10-201ENST00000641554 121 ntBASIC2.32□□□□□ -2.04
LIG1P18858 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LIG1P18858 MIR520C-201ENST00000385005 87 ntBASIC2.31□□□□□ -2.04
LIG1P18858 MIR653-201ENST00000385279 96 ntBASIC2.31□□□□□ -2.04
LIG1P18858 AL451046.2-201ENST00000403074 277 ntBASIC2.31□□□□□ -2.04
LIG1P18858 AC004965.1-201ENST00000413033 213 ntBASIC2.31□□□□□ -2.04
LIG1P18858 AC245047.7-201ENST00000440265 293 ntBASIC2.31□□□□□ -2.04
LIG1P18858 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.31□□□□□ -2.04
LIG1P18858 MIR5089-201ENST00000580047 84 ntBASIC2.31□□□□□ -2.04
LIG1P18858 MIR4439-201ENST00000583746 80 ntBASIC2.31□□□□□ -2.04
LIG1P18858 MIR548Z-201ENST00000584743 97 ntBASIC2.31□□□□□ -2.04
LIG1P18858 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
LIG1P18858 RNA5SP173-201ENST00000364857 136 ntBASIC2.3□□□□□ -2.04
LIG1P18858 RNU6-342P-201ENST00000384521 104 ntBASIC2.3□□□□□ -2.04
LIG1P18858 RNU6-602P-201ENST00000411155 105 ntBASIC2.3□□□□□ -2.04
LIG1P18858 AC108729.3-201ENST00000513484 108 ntBASIC2.3□□□□□ -2.04
LIG1P18858 RNU7-2P-201ENST00000516096 62 ntBASIC2.3□□□□□ -2.04
LIG1P18858 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.3□□□□□ -2.04
LIG1P18858 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.29□□□□□ -2.04
LIG1P18858 Y_RNA.659-201ENST00000515994 113 ntBASIC2.29□□□□□ -2.04
LIG1P18858 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
LIG1P18858 AC012493.3-201ENST00000604494 112 ntBASIC2.29□□□□□ -2.04
LIG1P18858 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LIG1P18858 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.28□□□□□ -2.04
LIG1P18858 Y_RNA.17-201ENST00000362433 111 ntBASIC2.28□□□□□ -2.04
LIG1P18858 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.28□□□□□ -2.04
LIG1P18858 Y_RNA.593-201ENST00000410292 98 ntBASIC2.28□□□□□ -2.04
LIG1P18858 AL161935.2-201ENST00000414627 60 ntBASIC2.28□□□□□ -2.04
LIG1P18858 RNU6-322P-201ENST00000516010 103 ntBASIC2.28□□□□□ -2.04
LIG1P18858 Y_RNA.705-201ENST00000516862 110 ntBASIC2.28□□□□□ -2.04
LIG1P18858 AP003327.1-201ENST00000529684 127 ntBASIC2.28□□□□□ -2.04
LIG1P18858 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.28□□□□□ -2.04
LIG1P18858 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
LIG1P18858 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.28□□□□□ -2.04
LIG1P18858 AP000648.3-201ENST00000623539 4507 ntBASIC2.28□□□□□ -2.04
LIG1P18858 RNY1P10-201ENST00000363268 113 ntBASIC2.27□□□□□ -2.05
LIG1P18858 MIR206-201ENST00000384872 86 ntBASIC2.27□□□□□ -2.05
LIG1P18858 RNU6-972P-201ENST00000391208 107 ntBASIC2.27□□□□□ -2.05
LIG1P18858 RNU6-1086P-201ENST00000410930 100 ntBASIC2.27□□□□□ -2.05
LIG1P18858 CYP3A52P-201ENST00000563326 91 ntBASIC2.27□□□□□ -2.05
LIG1P18858 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
LIG1P18858 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.27□□□□□ -2.05
LIG1P18858 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
LIG1P18858 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIG1P18858 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIG1P18858 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIG1P18858 MIR494-201ENST00000349529 81 ntBASIC2.26□□□□□ -2.05
LIG1P18858 RNU6-887P-201ENST00000410660 100 ntBASIC2.26□□□□□ -2.05
LIG1P18858 BTF3P4-201ENST00000418852 495 ntBASIC2.26□□□□□ -2.05
LIG1P18858 RPL31P63-201ENST00000422565 375 ntBASIC2.26□□□□□ -2.05
LIG1P18858 UBL5P1-201ENST00000507979 193 ntBASIC2.26□□□□□ -2.05
LIG1P18858 RNU7-79P-201ENST00000516082 62 ntBASIC2.26□□□□□ -2.05
LIG1P18858 RNU6-162P-201ENST00000516228 103 ntBASIC2.26□□□□□ -2.05
LIG1P18858 RNU6-1006P-201ENST00000516998 103 ntBASIC2.26□□□□□ -2.05
LIG1P18858 AC022254.1-201ENST00000567857 235 ntBASIC2.26□□□□□ -2.05
LIG1P18858 MIR548AO-201ENST00000579992 96 ntBASIC2.26□□□□□ -2.05
LIG1P18858 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.25□□□□□ -2.05
LIG1P18858 Y_RNA.467-201ENST00000384297 102 ntBASIC2.25□□□□□ -2.05
LIG1P18858 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LIG1P18858 AC090844.1-201ENST00000422019 156 ntBASIC2.25□□□□□ -2.05
LIG1P18858 snoU13.26-201ENST00000459452 105 ntBASIC2.25□□□□□ -2.05
LIG1P18858 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.25□□□□□ -2.05
LIG1P18858 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.25□□□□□ -2.05
LIG1P18858 MIR4251-201ENST00000635819 61 ntBASIC2.25□□□□□ -2.05
LIG1P18858 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LIG1P18858 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LIG1P18858 RNU6-573P-201ENST00000383938 106 ntBASIC2.24□□□□□ -2.05
LIG1P18858 SUMO2P12-201ENST00000405924 140 ntBASIC2.24□□□□□ -2.05
LIG1P18858 RNU6-592P-201ENST00000411333 103 ntBASIC2.24□□□□□ -2.05
LIG1P18858 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LIG1P18858 JTBP1-201ENST00000441314 247 ntBASIC2.24□□□□□ -2.05
LIG1P18858 SNORD67.1-201ENST00000516618 108 ntBASIC2.24□□□□□ -2.05
LIG1P18858 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.24□□□□□ -2.05
LIG1P18858 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
LIG1P18858 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIG1P18858 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
LIG1P18858 SNORD114-10-201ENST00000363409 72 ntBASIC2.23□□□□□ -2.05
LIG1P18858 Y_RNA.140-201ENST00000363474 103 ntBASIC2.23□□□□□ -2.05
LIG1P18858 SNORD38.1-201ENST00000363863 68 ntBASIC2.23□□□□□ -2.05
LIG1P18858 Y_RNA.247-201ENST00000364500 92 ntBASIC2.23□□□□□ -2.05
LIG1P18858 SNORD38B-201ENST00000384690 67 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-813P-201ENST00000384691 107 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-1307P-201ENST00000391012 103 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-447P-201ENST00000410293 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-1118P-201ENST00000410382 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-1076P-201ENST00000410397 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-355P-201ENST00000410427 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-791P-201ENST00000410467 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-705P-201ENST00000410601 104 ntBASIC2.23□□□□□ -2.05
LIG1P18858 RNU6-1100P-201ENST00000410691 104 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms