Protein–RNA interactions for Protein: P13727

PRG2, Bone marrow proteoglycan, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG2P13727 AL512598.1-201ENST00000610158 273 ntBASIC1.14□□□□□ -2.23
PRG2P13727 AL442128.1-201ENST00000615151 90 ntBASIC1.14□□□□□ -2.23
PRG2P13727 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
PRG2P13727 AC091932.4-201ENST00000623386 200 ntBASIC1.14□□□□□ -2.23
PRG2P13727 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
PRG2P13727 SNORD68-201ENST00000363214 84 ntBASIC1.13□□□□□ -2.23
PRG2P13727 RNU6-690P-201ENST00000365242 106 ntBASIC1.13□□□□□ -2.23
PRG2P13727 Y_RNA.410-201ENST00000383992 113 ntBASIC1.13□□□□□ -2.23
PRG2P13727 MIR548D2-201ENST00000384955 97 ntBASIC1.13□□□□□ -2.23
PRG2P13727 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
PRG2P13727 AL512326.2-201ENST00000426359 151 ntBASIC1.13□□□□□ -2.23
PRG2P13727 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
PRG2P13727 AC087685.1-201ENST00000587507 141 ntBASIC1.13□□□□□ -2.23
PRG2P13727 MIR1255B1-201ENST00000636325 63 ntBASIC1.13□□□□□ -2.23
PRG2P13727 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
PRG2P13727 Y_RNA.78-201ENST00000362970 110 ntBASIC1.12□□□□□ -2.23
PRG2P13727 Y_RNA.107-201ENST00000363190 121 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNU4-16P-201ENST00000364737 141 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNA5SP173-201ENST00000364857 136 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNY1P6-201ENST00000384193 109 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNU6-1152P-201ENST00000384576 107 ntBASIC1.12□□□□□ -2.23
PRG2P13727 SNORA26.2-201ENST00000390922 122 ntBASIC1.12□□□□□ -2.23
PRG2P13727 MIR1302-5-201ENST00000408164 150 ntBASIC1.12□□□□□ -2.23
PRG2P13727 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.12□□□□□ -2.23
PRG2P13727 POLR2J4-204ENST00000418424 324 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNU7-164P-201ENST00000459221 62 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNU7-45P-201ENST00000459460 63 ntBASIC1.12□□□□□ -2.23
PRG2P13727 AC114811.1-201ENST00000507207 168 ntBASIC1.12□□□□□ -2.23
PRG2P13727 SNORA40.13-201ENST00000516379 120 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNA5SP395-201ENST00000516567 118 ntBASIC1.12□□□□□ -2.23
PRG2P13727 RNU6-158P-201ENST00000517104 100 ntBASIC1.12□□□□□ -2.23
PRG2P13727 AP003484.1-201ENST00000530974 250 ntBASIC1.12□□□□□ -2.23
PRG2P13727 MIR4305-201ENST00000583252 102 ntBASIC1.12□□□□□ -2.23
PRG2P13727 AC021443.1-201ENST00000604478 211 ntBASIC1.12□□□□□ -2.23
PRG2P13727 MALAT1.1-201ENST00000618249 95 ntBASIC1.12□□□□□ -2.23
PRG2P13727 AL589743.1-201ENST00000551932 2712 ntBASIC1.11□□□□□ -2.23
PRG2P13727 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
PRG2P13727 RNU6-1099P-201ENST00000363533 107 ntBASIC1.11□□□□□ -2.23
PRG2P13727 RNY4P6-201ENST00000363667 96 ntBASIC1.11□□□□□ -2.23
PRG2P13727 SNORA7.1-201ENST00000363750 139 ntBASIC1.11□□□□□ -2.23
PRG2P13727 Y_RNA.290-201ENST00000364879 114 ntBASIC1.11□□□□□ -2.23
PRG2P13727 Y_RNA.593-201ENST00000410292 98 ntBASIC1.11□□□□□ -2.23
PRG2P13727 RN7SKP200-201ENST00000410564 320 ntBASIC1.11□□□□□ -2.23
PRG2P13727 RNA5SP144-201ENST00000410846 116 ntBASIC1.11□□□□□ -2.23
PRG2P13727 RPS3AP1-201ENST00000413190 320 ntBASIC1.11□□□□□ -2.23
PRG2P13727 AC113410.1-201ENST00000505029 247 ntBASIC1.11□□□□□ -2.23
PRG2P13727 MIR8054-201ENST00000620877 86 ntBASIC1.11□□□□□ -2.23
PRG2P13727 MIR1245B-201ENST00000636115 69 ntBASIC1.11□□□□□ -2.23
PRG2P13727 AL162726.3-218ENST00000636401 95 ntBASIC1.11□□□□□ -2.23
PRG2P13727 AC091304.10-201ENST00000641554 121 ntBASIC1.11□□□□□ -2.23
PRG2P13727 MIR302B-201ENST00000362188 73 ntBASIC1.1□□□□□ -2.23
PRG2P13727 Y_RNA.171-201ENST00000363760 102 ntBASIC1.1□□□□□ -2.23
PRG2P13727 Y_RNA.351-201ENST00000365436 96 ntBASIC1.1□□□□□ -2.23
PRG2P13727 RNU6-442P-201ENST00000383968 104 ntBASIC1.1□□□□□ -2.23
PRG2P13727 MIR577-201ENST00000385196 96 ntBASIC1.1□□□□□ -2.23
PRG2P13727 SNORA26.6-201ENST00000391256 115 ntBASIC1.1□□□□□ -2.23
PRG2P13727 U8.16-201ENST00000391279 133 ntBASIC1.1□□□□□ -2.23
PRG2P13727 RNU6-1190P-201ENST00000410811 104 ntBASIC1.1□□□□□ -2.23
PRG2P13727 AP1B1P2-201ENST00000416196 106 ntBASIC1.1□□□□□ -2.23
PRG2P13727 AC245047.3-201ENST00000429428 127 ntBASIC1.1□□□□□ -2.23
PRG2P13727 RNU6-893P-201ENST00000458841 100 ntBASIC1.1□□□□□ -2.23
PRG2P13727 RNU6-165P-201ENST00000517170 99 ntBASIC1.1□□□□□ -2.23
PRG2P13727 AC012531.4-201ENST00000616509 177 ntBASIC1.1□□□□□ -2.23
PRG2P13727 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.1□□□□□ -2.23
PRG2P13727 Y_RNA.818-201ENST00000618813 71 ntBASIC1.1□□□□□ -2.23
PRG2P13727 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PRG2P13727 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
PRG2P13727 Y_RNA.49-201ENST00000362714 112 ntBASIC1.09□□□□□ -2.23
PRG2P13727 SNORD115-19-201ENST00000363098 82 ntBASIC1.09□□□□□ -2.23
PRG2P13727 SNORD115-18-201ENST00000363293 82 ntBASIC1.09□□□□□ -2.23
PRG2P13727 SNORD14E-201ENST00000364009 85 ntBASIC1.09□□□□□ -2.23
PRG2P13727 SNORD115-17-201ENST00000364612 82 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU1-133P-201ENST00000364867 167 ntBASIC1.09□□□□□ -2.23
PRG2P13727 snoU2-30.1-201ENST00000365012 70 ntBASIC1.09□□□□□ -2.23
PRG2P13727 Y_RNA.336-201ENST00000365307 109 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU6-787P-201ENST00000384032 107 ntBASIC1.09□□□□□ -2.23
PRG2P13727 Y_RNA.470-201ENST00000384307 117 ntBASIC1.09□□□□□ -2.23
PRG2P13727 Y_RNA.544-201ENST00000384650 113 ntBASIC1.09□□□□□ -2.23
PRG2P13727 Y_RNA.558-201ENST00000384685 113 ntBASIC1.09□□□□□ -2.23
PRG2P13727 MIR605-201ENST00000385078 83 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU6-679P-201ENST00000391003 106 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU6-1307P-201ENST00000391012 103 ntBASIC1.09□□□□□ -2.23
PRG2P13727 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.09□□□□□ -2.23
PRG2P13727 AC009474.2-201ENST00000451383 136 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU6-998P-201ENST00000515894 101 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU2-13P-201ENST00000515909 113 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RN7SKP12-201ENST00000516275 143 ntBASIC1.09□□□□□ -2.23
PRG2P13727 RNU7-181P-201ENST00000517234 74 ntBASIC1.09□□□□□ -2.23
PRG2P13727 AC004812.1-201ENST00000540773 146 ntBASIC1.09□□□□□ -2.23
PRG2P13727 AC141557.1-201ENST00000540982 400 ntBASIC1.09□□□□□ -2.23
PRG2P13727 MIR4777-201ENST00000583710 86 ntBASIC1.09□□□□□ -2.23
PRG2P13727 AL513534.2-201ENST00000603836 250 ntBASIC1.09□□□□□ -2.23
PRG2P13727 AC015726.2-201ENST00000620112 122 ntBASIC1.09□□□□□ -2.23
PRG2P13727 MIR6841-201ENST00000637129 72 ntBASIC1.09□□□□□ -2.23
PRG2P13727 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PRG2P13727 MIR337-201ENST00000362281 93 ntBASIC1.08□□□□□ -2.24
PRG2P13727 RNU6-1084P-201ENST00000362498 107 ntBASIC1.08□□□□□ -2.24
PRG2P13727 Y_RNA.213-201ENST00000364178 111 ntBASIC1.08□□□□□ -2.24
PRG2P13727 Y_RNA.265-201ENST00000364677 108 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms