Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIRLET7A1-201ENST00000362295 80 ntBASIC2.55□□□□□ -2
THBS1P07996 RNA5SP48-201ENST00000363969 126 ntBASIC2.55□□□□□ -2
THBS1P07996 Y_RNA.508-201ENST00000384502 114 ntBASIC2.55□□□□□ -2
THBS1P07996 Z98742.3-201ENST00000418637 326 ntBASIC2.55□□□□□ -2
THBS1P07996 MIR4796-201ENST00000580742 81 ntBASIC2.55□□□□□ -2
THBS1P07996 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.55□□□□□ -2
THBS1P07996 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
THBS1P07996 SNORA63.2-201ENST00000362603 126 ntBASIC2.54□□□□□ -2
THBS1P07996 SNORA72.6-201ENST00000384520 129 ntBASIC2.54□□□□□ -2
THBS1P07996 AC004223.1-201ENST00000479840 271 ntBASIC2.54□□□□□ -2
THBS1P07996 RPS27P21-201ENST00000486977 252 ntBASIC2.54□□□□□ -2
THBS1P07996 RNU6-807P-201ENST00000516805 107 ntBASIC2.54□□□□□ -2
THBS1P07996 AC090897.1-201ENST00000580909 226 ntBASIC2.54□□□□□ -2
THBS1P07996 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
THBS1P07996 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
THBS1P07996 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
THBS1P07996 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
THBS1P07996 RNU6-360P-201ENST00000390944 104 ntBASIC2.53□□□□□ -2
THBS1P07996 HMGN2P39-201ENST00000398005 273 ntBASIC2.53□□□□□ -2
THBS1P07996 RNA5SP501-201ENST00000410990 112 ntBASIC2.53□□□□□ -2
THBS1P07996 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
THBS1P07996 AC105272.1-201ENST00000438604 198 ntBASIC2.53□□□□□ -2
THBS1P07996 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.53□□□□□ -2
THBS1P07996 MIR1297-201ENST00000637311 77 ntBASIC2.53□□□□□ -2
THBS1P07996 Y_RNA.264-201ENST00000364665 102 ntBASIC2.52□□□□□ -2.01
THBS1P07996 RNU6-811P-201ENST00000384069 107 ntBASIC2.52□□□□□ -2.01
THBS1P07996 RNU6-850P-201ENST00000516934 103 ntBASIC2.52□□□□□ -2.01
THBS1P07996 MIR4500-201ENST00000579472 76 ntBASIC2.52□□□□□ -2.01
THBS1P07996 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
THBS1P07996 RNA5SP126-201ENST00000365092 109 ntBASIC2.51□□□□□ -2.01
THBS1P07996 RNA5SP21-201ENST00000410917 96 ntBASIC2.51□□□□□ -2.01
THBS1P07996 AC108938.1-201ENST00000451204 136 ntBASIC2.51□□□□□ -2.01
THBS1P07996 RNU6-917P-201ENST00000516294 104 ntBASIC2.51□□□□□ -2.01
THBS1P07996 RNU6-523P-201ENST00000516304 54 ntBASIC2.51□□□□□ -2.01
THBS1P07996 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
THBS1P07996 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
THBS1P07996 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
THBS1P07996 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
THBS1P07996 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
THBS1P07996 MIR449A-201ENST00000362113 91 ntBASIC2.5□□□□□ -2.01
THBS1P07996 MIR653-201ENST00000385279 96 ntBASIC2.5□□□□□ -2.01
THBS1P07996 RNU7-85P-201ENST00000458851 63 ntBASIC2.5□□□□□ -2.01
THBS1P07996 snoU13.2-201ENST00000459201 104 ntBASIC2.5□□□□□ -2.01
THBS1P07996 AC138749.4-201ENST00000563970 127 ntBASIC2.5□□□□□ -2.01
THBS1P07996 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.5□□□□□ -2.01
THBS1P07996 AL096861.1-201ENST00000610899 123 ntBASIC2.5□□□□□ -2.01
THBS1P07996 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.5□□□□□ -2.01
THBS1P07996 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.5□□□□□ -2.01
THBS1P07996 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
THBS1P07996 RNU6-301P-201ENST00000384277 107 ntBASIC2.49□□□□□ -2.01
THBS1P07996 AL138827.1-201ENST00000402666 306 ntBASIC2.49□□□□□ -2.01
THBS1P07996 AC019129.1-201ENST00000403786 261 ntBASIC2.49□□□□□ -2.01
THBS1P07996 RNU4-83P-201ENST00000410863 133 ntBASIC2.49□□□□□ -2.01
THBS1P07996 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
THBS1P07996 AC125388.1-201ENST00000459631 156 ntBASIC2.49□□□□□ -2.01
THBS1P07996 MIR4536-1-201ENST00000583537 88 ntBASIC2.49□□□□□ -2.01
THBS1P07996 AC104984.5-201ENST00000586878 94 ntBASIC2.49□□□□□ -2.01
THBS1P07996 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
THBS1P07996 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
THBS1P07996 MIR548U-201ENST00000390728 81 ntBASIC2.48□□□□□ -2.01
THBS1P07996 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
THBS1P07996 Y_RNA.681-201ENST00000516445 113 ntBASIC2.48□□□□□ -2.01
THBS1P07996 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
THBS1P07996 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
THBS1P07996 MIR4319-201ENST00000577285 85 ntBASIC2.48□□□□□ -2.01
THBS1P07996 MIR3945-201ENST00000581853 98 ntBASIC2.48□□□□□ -2.01
THBS1P07996 SNORA4-201ENST00000584302 138 ntBASIC2.48□□□□□ -2.01
THBS1P07996 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
THBS1P07996 AC008163.1-202ENST00000636004 2889 ntBASIC2.47□□□□□ -2.01
THBS1P07996 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
THBS1P07996 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
THBS1P07996 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
THBS1P07996 DEFB122-202ENST00000569013 197 ntBASIC2.47□□□□□ -2.01
THBS1P07996 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
THBS1P07996 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
THBS1P07996 RNU6-161P-201ENST00000363051 106 ntBASIC2.46□□□□□ -2.02
THBS1P07996 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
THBS1P07996 RNU6-243P-201ENST00000391140 107 ntBASIC2.46□□□□□ -2.02
THBS1P07996 RNU6-1254P-201ENST00000391266 104 ntBASIC2.46□□□□□ -2.02
THBS1P07996 AC009474.2-201ENST00000451383 136 ntBASIC2.46□□□□□ -2.02
THBS1P07996 AC023790.1-201ENST00000482174 347 ntBASIC2.46□□□□□ -2.02
THBS1P07996 RNU7-41P-201ENST00000515917 61 ntBASIC2.46□□□□□ -2.02
THBS1P07996 SNORD111.1-201ENST00000516421 86 ntBASIC2.46□□□□□ -2.02
THBS1P07996 AC079600.2-201ENST00000550076 130 ntBASIC2.46□□□□□ -2.02
THBS1P07996 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.46□□□□□ -2.02
THBS1P07996 MIR3134-201ENST00000579433 74 ntBASIC2.46□□□□□ -2.02
THBS1P07996 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
THBS1P07996 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
THBS1P07996 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
THBS1P07996 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
THBS1P07996 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
THBS1P07996 U6.109-201ENST00000636749 87 ntBASIC2.46□□□□□ -2.02
THBS1P07996 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
THBS1P07996 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
THBS1P07996 Y_RNA.119-201ENST00000363301 96 ntBASIC2.45□□□□□ -2.02
THBS1P07996 MIR588-201ENST00000384900 83 ntBASIC2.45□□□□□ -2.02
THBS1P07996 MIR563-201ENST00000385080 79 ntBASIC2.45□□□□□ -2.02
THBS1P07996 SNORD77.2-201ENST00000391045 68 ntBASIC2.45□□□□□ -2.02
THBS1P07996 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.45□□□□□ -2.02
THBS1P07996 RNA5SP100-201ENST00000410903 110 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 373.1 ms