Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.13□□□□□ -2.39
CD74P04233 AC091932.4-201ENST00000623386 200 ntBASIC0.13□□□□□ -2.39
CD74P04233 Y_RNA.30-201ENST00000362572 97 ntBASIC0.12□□□□□ -2.39
CD74P04233 RNU6-238P-201ENST00000363313 106 ntBASIC0.12□□□□□ -2.39
CD74P04233 Y_RNA.416-201ENST00000384014 113 ntBASIC0.12□□□□□ -2.39
CD74P04233 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
CD74P04233 SNORA72.6-201ENST00000384520 129 ntBASIC0.12□□□□□ -2.39
CD74P04233 SNORA20-201ENST00000384662 132 ntBASIC0.12□□□□□ -2.39
CD74P04233 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
CD74P04233 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CD74P04233 U8.15-201ENST00000390947 134 ntBASIC0.12□□□□□ -2.39
CD74P04233 RNU6-1109P-201ENST00000391187 107 ntBASIC0.12□□□□□ -2.39
CD74P04233 SNORA79-201ENST00000408376 140 ntBASIC0.12□□□□□ -2.39
CD74P04233 Y_RNA.618-201ENST00000410949 107 ntBASIC0.12□□□□□ -2.39
CD74P04233 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.12□□□□□ -2.39
CD74P04233 SNORD2.1-201ENST00000458762 69 ntBASIC0.12□□□□□ -2.39
CD74P04233 MIR3152-201ENST00000579801 74 ntBASIC0.12□□□□□ -2.39
CD74P04233 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
CD74P04233 MIR5197-201ENST00000583721 112 ntBASIC0.12□□□□□ -2.39
CD74P04233 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.12□□□□□ -2.39
CD74P04233 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
CD74P04233 Y_RNA.42-201ENST00000362660 108 ntBASIC0.11□□□□□ -2.39
CD74P04233 SNORA36.1-201ENST00000363424 132 ntBASIC0.11□□□□□ -2.39
CD74P04233 Y_RNA.176-201ENST00000363815 109 ntBASIC0.11□□□□□ -2.39
CD74P04233 SNORA33.2-201ENST00000365413 134 ntBASIC0.11□□□□□ -2.39
CD74P04233 RNU6-639P-201ENST00000384074 107 ntBASIC0.11□□□□□ -2.39
CD74P04233 Y_RNA.454-201ENST00000384224 113 ntBASIC0.11□□□□□ -2.39
CD74P04233 Y_RNA.476-201ENST00000384347 108 ntBASIC0.11□□□□□ -2.39
CD74P04233 Y_RNA.542-201ENST00000384641 111 ntBASIC0.11□□□□□ -2.39
CD74P04233 MTATP8P1-201ENST00000467115 207 ntBASIC0.11□□□□□ -2.39
CD74P04233 RNU6-635P-201ENST00000516651 102 ntBASIC0.11□□□□□ -2.39
CD74P04233 RNU7-70P-201ENST00000516941 66 ntBASIC0.11□□□□□ -2.39
CD74P04233 Y_RNA.82-201ENST00000363000 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.92-201ENST00000363043 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.235-201ENST00000364412 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.251-201ENST00000364551 99 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.306-201ENST00000365015 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.312-201ENST00000365089 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.322-201ENST00000365151 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 RNU6-728P-201ENST00000365375 104 ntBASIC0.1□□□□□ -2.39
CD74P04233 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
CD74P04233 AL512326.2-201ENST00000426359 151 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.650-201ENST00000459002 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 RNU6-863P-201ENST00000515989 104 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.777-201ENST00000516982 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 AC141846.1-201ENST00000568348 142 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.771-201ENST00000598668 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 MIR6082-201ENST00000613604 109 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.789-201ENST00000622480 102 ntBASIC0.1□□□□□ -2.39
CD74P04233 Y_RNA.32-201ENST00000362589 110 ntBASIC0.09□□□□□ -2.4
CD74P04233 SNORA22.1-201ENST00000362701 134 ntBASIC0.09□□□□□ -2.4
CD74P04233 RNU4-16P-201ENST00000364737 141 ntBASIC0.09□□□□□ -2.4
CD74P04233 RNU4-17P-201ENST00000365598 141 ntBASIC0.09□□□□□ -2.4
CD74P04233 Y_RNA.374-201ENST00000365606 101 ntBASIC0.09□□□□□ -2.4
CD74P04233 Y_RNA.430-201ENST00000384081 110 ntBASIC0.09□□□□□ -2.4
CD74P04233 RNU6-381P-201ENST00000391259 108 ntBASIC0.09□□□□□ -2.4
CD74P04233 SNORA31.14-201ENST00000516728 116 ntBASIC0.09□□□□□ -2.4
CD74P04233 RNU6-1153P-201ENST00000516760 105 ntBASIC0.09□□□□□ -2.4
CD74P04233 Y_RNA.701-201ENST00000516812 110 ntBASIC0.09□□□□□ -2.4
CD74P04233 RNA5SP268-201ENST00000516828 124 ntBASIC0.09□□□□□ -2.4
CD74P04233 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.09□□□□□ -2.4
CD74P04233 MIR4491-201ENST00000581087 68 ntBASIC0.09□□□□□ -2.4
CD74P04233 AC078938.1-201ENST00000620993 318 ntBASIC0.09□□□□□ -2.4
CD74P04233 AC021613.1-201ENST00000623880 111 ntBASIC0.09□□□□□ -2.4
CD74P04233 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CD74P04233 Y_RNA.54-201ENST00000362766 105 ntBASIC0.08□□□□□ -2.4
CD74P04233 Y_RNA.483-201ENST00000384380 101 ntBASIC0.08□□□□□ -2.4
CD74P04233 SNORA18-201ENST00000384416 132 ntBASIC0.08□□□□□ -2.4
CD74P04233 MT-TW-201ENST00000387382 68 ntBASIC0.08□□□□□ -2.4
CD74P04233 Y_RNA.588-201ENST00000391254 102 ntBASIC0.08□□□□□ -2.4
CD74P04233 MIR1302-6-201ENST00000408466 90 ntBASIC0.08□□□□□ -2.4
CD74P04233 SUMO1P3-201ENST00000439961 304 ntBASIC0.08□□□□□ -2.4
CD74P04233 AC069271.1-201ENST00000445577 156 ntBASIC0.08□□□□□ -2.4
CD74P04233 AL121914.1-201ENST00000450188 156 ntBASIC0.08□□□□□ -2.4
CD74P04233 AC069113.3-201ENST00000521019 150 ntBASIC0.08□□□□□ -2.4
CD74P04233 AL442067.1-201ENST00000613261 223 ntBASIC0.08□□□□□ -2.4
CD74P04233 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
CD74P04233 RNU6-797P-201ENST00000363101 109 ntBASIC0.07□□□□□ -2.4
CD74P04233 RNU6-1292P-201ENST00000383856 107 ntBASIC0.07□□□□□ -2.4
CD74P04233 Y_RNA.461-201ENST00000384263 103 ntBASIC0.07□□□□□ -2.4
CD74P04233 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
CD74P04233 Y_RNA.681-201ENST00000516445 113 ntBASIC0.07□□□□□ -2.4
CD74P04233 SNORA25.16-201ENST00000516741 121 ntBASIC0.07□□□□□ -2.4
CD74P04233 Y_RNA.697-201ENST00000516776 113 ntBASIC0.07□□□□□ -2.4
CD74P04233 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
CD74P04233 MTND5P34-201ENST00000568888 325 ntBASIC0.07□□□□□ -2.4
CD74P04233 AC044792.1-201ENST00000593294 196 ntBASIC0.07□□□□□ -2.4
CD74P04233 Y_RNA.262-201ENST00000364641 102 ntBASIC0.06□□□□□ -2.4
CD74P04233 Y_RNA.423-201ENST00000384057 113 ntBASIC0.06□□□□□ -2.4
CD74P04233 RNU6-535P-201ENST00000384722 107 ntBASIC0.06□□□□□ -2.4
CD74P04233 MTCYBP6-201ENST00000441810 138 ntBASIC0.06□□□□□ -2.4
CD74P04233 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
CD74P04233 RNY3P16-201ENST00000516338 101 ntBASIC0.06□□□□□ -2.4
CD74P04233 MIR4643-201ENST00000577473 78 ntBASIC0.06□□□□□ -2.4
CD74P04233 MIR4282-201ENST00000583613 67 ntBASIC0.06□□□□□ -2.4
CD74P04233 AL365205.2-201ENST00000594586 68 ntBASIC0.06□□□□□ -2.4
CD74P04233 AC067863.3-201ENST00000624172 122 ntBASIC0.06□□□□□ -2.4
CD74P04233 MIR335-201ENST00000362173 94 ntBASIC0.05□□□□□ -2.4
CD74P04233 RNU6-1229P-201ENST00000364295 107 ntBASIC0.05□□□□□ -2.4
CD74P04233 Y_RNA.277-201ENST00000364754 102 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms