Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RNU6-769P-201ENST00000384407 104 ntBASIC-1.65□□□□□ -2.67
APOBP04114 SNORD19-201ENST00000391191 68 ntBASIC-1.65□□□□□ -2.67
APOBP04114 MIR1284-201ENST00000408337 120 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RPL35AP4-201ENST00000412007 102 ntBASIC-1.65□□□□□ -2.67
APOBP04114 AC023449.1-201ENST00000454464 154 ntBASIC-1.65□□□□□ -2.67
APOBP04114 AC091179.3-201ENST00000474761 144 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RNU6-201P-201ENST00000517100 61 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RNA5SP106-201ENST00000517274 100 ntBASIC-1.65□□□□□ -2.67
APOBP04114 MIR3118-1-201ENST00000581787 76 ntBASIC-1.65□□□□□ -2.67
APOBP04114 SNORD115-22-201ENST00000364456 82 ntBASIC-1.65□□□□□ -2.67
APOBP04114 SNORA53-201ENST00000391141 249 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.65□□□□□ -2.67
APOBP04114 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.65□□□□□ -2.67
APOBP04114 AP002795.1-201ENST00000534879 84 ntBASIC-1.65□□□□□ -2.67
APOBP04114 MTCO3P23-201ENST00000561363 289 ntBASIC-1.65□□□□□ -2.67
APOBP04114 AC124303.1-201ENST00000605703 360 ntBASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.65□□□□□ -2.67
APOBP04114 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.65□□□□□ -2.67
APOBP04114 RNU6-774P-201ENST00000363238 107 ntBASIC-1.66□□□□□ -2.67
APOBP04114 RNU6-80P-201ENST00000384195 107 ntBASIC-1.66□□□□□ -2.67
APOBP04114 RNU6-21P-201ENST00000384710 107 ntBASIC-1.66□□□□□ -2.67
APOBP04114 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.66□□□□□ -2.67
APOBP04114 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.66□□□□□ -2.67
APOBP04114 AC123904.2-201ENST00000548059 300 ntBASIC-1.66□□□□□ -2.67
APOBP04114 MIR23C-201ENST00000579846 100 ntBASIC-1.66□□□□□ -2.67
APOBP04114 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.66□□□□□ -2.67
APOBP04114 ACA59.1-201ENST00000515966 143 ntBASIC-1.66□□□□□ -2.67
APOBP04114 RNU6-971P-201ENST00000516920 106 ntBASIC-1.66□□□□□ -2.67
APOBP04114 RNU6-454P-201ENST00000364292 107 ntBASIC-1.66□□□□□ -2.68
APOBP04114 SNORD115-7-201ENST00000365306 82 ntBASIC-1.66□□□□□ -2.68
APOBP04114 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.66□□□□□ -2.68
APOBP04114 AC092807.2-201ENST00000609367 243 ntBASIC-1.66□□□□□ -2.68
APOBP04114 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.66□□□□□ -2.68
APOBP04114 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.66□□□□□ -2.68
APOBP04114 SNORD114-13-201ENST00000364377 74 ntBASIC-1.66□□□□□ -2.68
APOBP04114 MIR450B-201ENST00000401182 78 ntBASIC-1.66□□□□□ -2.68
APOBP04114 AC009961.2-201ENST00000435771 251 ntBASIC-1.66□□□□□ -2.68
APOBP04114 MTCO3P42-201ENST00000509488 518 ntBASIC-1.66□□□□□ -2.68
APOBP04114 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU6-462P-201ENST00000362659 105 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU7-137P-201ENST00000516788 62 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.67□□□□□ -2.68
APOBP04114 MIR1264-201ENST00000616374 69 ntBASIC-1.67□□□□□ -2.68
APOBP04114 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.67□□□□□ -2.68
APOBP04114 SNORD63B-201ENST00000411005 70 ntBASIC-1.67□□□□□ -2.68
APOBP04114 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.67□□□□□ -2.68
APOBP04114 SNORD56.2-201ENST00000363242 71 ntBASIC-1.67□□□□□ -2.68
APOBP04114 SNORD101-201ENST00000384027 73 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.67□□□□□ -2.68
APOBP04114 AC113618.1-201ENST00000416747 285 ntBASIC-1.67□□□□□ -2.68
APOBP04114 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU6-978P-201ENST00000364371 103 ntBASIC-1.67□□□□□ -2.68
APOBP04114 MIR558-201ENST00000384920 94 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU7-48P-201ENST00000458875 63 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU7-35P-201ENST00000517174 62 ntBASIC-1.67□□□□□ -2.68
APOBP04114 RNU1-54P-201ENST00000517181 120 ntBASIC-1.67□□□□□ -2.68
APOBP04114 PISRT1.1-201ENST00000616930 107 ntBASIC-1.67□□□□□ -2.68
APOBP04114 AL158209.2-201ENST00000619266 216 ntBASIC-1.67□□□□□ -2.68
APOBP04114 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.68□□□□□ -2.68
APOBP04114 RNU6-694P-201ENST00000364071 147 ntBASIC-1.68□□□□□ -2.68
APOBP04114 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.68□□□□□ -2.68
APOBP04114 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.68□□□□□ -2.68
APOBP04114 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.68□□□□□ -2.68
APOBP04114 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.68□□□□□ -2.68
APOBP04114 RNU6-630P-201ENST00000391258 106 ntBASIC-1.68□□□□□ -2.68
APOBP04114 HSPE1P25-201ENST00000455484 251 ntBASIC-1.68□□□□□ -2.68
APOBP04114 MTND4LP18-201ENST00000526864 291 ntBASIC-1.68□□□□□ -2.68
APOBP04114 MIR5188-201ENST00000583467 113 ntBASIC-1.68□□□□□ -2.68
APOBP04114 SNORD73A-201ENST00000386062 65 ntBASIC-1.69□□□□□ -2.68
APOBP04114 AC144568.1-201ENST00000520139 137 ntBASIC-1.69□□□□□ -2.68
APOBP04114 MIR5708-201ENST00000579723 85 ntBASIC-1.69□□□□□ -2.68
APOBP04114 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.69□□□□□ -2.68
APOBP04114 AC073534.2-201ENST00000620377 381 ntBASIC-1.69□□□□□ -2.68
APOBP04114 RNU2-61P-201ENST00000411069 191 ntBASIC-1.69□□□□□ -2.68
APOBP04114 AC009248.2-201ENST00000619826 254 ntBASIC-1.69□□□□□ -2.68
APOBP04114 RNU6-597P-201ENST00000365620 102 ntBASIC-1.69□□□□□ -2.68
APOBP04114 RNU6-800P-201ENST00000384473 103 ntBASIC-1.69□□□□□ -2.68
APOBP04114 AC007494.3-201ENST00000624660 743 ntBASIC-1.69□□□□□ -2.68
APOBP04114 RNU6-282P-201ENST00000365357 103 ntBASIC-1.7□□□□□ -2.68
APOBP04114 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.7□□□□□ -2.68
APOBP04114 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.7□□□□□ -2.68
APOBP04114 RNU7-45P-201ENST00000459460 63 ntBASIC-1.7□□□□□ -2.68
APOBP04114 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.7□□□□□ -2.68
APOBP04114 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.7□□□□□ -2.68
APOBP04114 RNU6-861P-201ENST00000516745 106 ntBASIC-1.7□□□□□ -2.68
APOBP04114 MIR4662B-201ENST00000579498 81 ntBASIC-1.7□□□□□ -2.68
APOBP04114 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.7□□□□□ -2.68
APOBP04114 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.7□□□□□ -2.68
APOBP04114 AL009048.1-201ENST00000450437 298 ntBASIC-1.7□□□□□ -2.68
APOBP04114 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.7□□□□□ -2.68
APOBP04114 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.7□□□□□ -2.68
APOBP04114 RNU6-596P-201ENST00000365395 98 ntBASIC-1.7□□□□□ -2.68
APOBP04114 AC026741.1-201ENST00000605892 482 ntBASIC-1.7□□□□□ -2.68
APOBP04114 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms