Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR8063-201ENST00000621930 81 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFAP04085 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFAP04085 Y_RNA.448-201ENST00000384185 108 ntBASIC2.25□□□□□ -2.05
PDGFAP04085 RNU6-644P-201ENST00000391155 98 ntBASIC2.25□□□□□ -2.05
PDGFAP04085 snoU13.9-201ENST00000458927 103 ntBASIC2.25□□□□□ -2.05
PDGFAP04085 RNU7-137P-201ENST00000516788 62 ntBASIC2.25□□□□□ -2.05
PDGFAP04085 MIR4439-201ENST00000583746 80 ntBASIC2.25□□□□□ -2.05
PDGFAP04085 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
PDGFAP04085 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
PDGFAP04085 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDGFAP04085 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.24□□□□□ -2.05
PDGFAP04085 RNU6-396P-201ENST00000365369 105 ntBASIC2.24□□□□□ -2.05
PDGFAP04085 RNU6-482P-201ENST00000391068 107 ntBASIC2.24□□□□□ -2.05
PDGFAP04085 AL356320.1-201ENST00000429616 163 ntBASIC2.24□□□□□ -2.05
PDGFAP04085 RNU6-947P-201ENST00000516264 106 ntBASIC2.24□□□□□ -2.05
PDGFAP04085 AC091304.10-201ENST00000641554 121 ntBASIC2.24□□□□□ -2.05
PDGFAP04085 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDGFAP04085 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
PDGFAP04085 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
PDGFAP04085 SNORD38.1-201ENST00000363863 68 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 MIR30A-201ENST00000385092 71 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 RPS29P28-201ENST00000446439 141 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 Y_RNA.705-201ENST00000516862 110 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 AC141846.1-201ENST00000568348 142 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 MIR4777-201ENST00000583710 86 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 PRELID3BP2-201ENST00000605362 201 ntBASIC2.23□□□□□ -2.05
PDGFAP04085 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDGFAP04085 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PDGFAP04085 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDGFAP04085 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 Y_RNA.290-201ENST00000364879 114 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 RNY1P13-201ENST00000365030 105 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 AL603825.1-201ENST00000438481 80 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 AC108210.2-201ENST00000503681 201 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 UBL5P1-201ENST00000507979 193 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 Y_RNA.676-201ENST00000516393 96 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 AC026421.1-201ENST00000519101 163 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 MIR548Z-201ENST00000584743 97 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 AC103810.8-201ENST00000607347 118 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 U7.3-201ENST00000616123 62 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 AL662814.1-201ENST00000617364 121 ntBASIC2.22□□□□□ -2.05
PDGFAP04085 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDGFAP04085 SNORD114-1-201ENST00000362705 72 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 SNORD33-201ENST00000362761 85 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 Y_RNA.98-201ENST00000363109 102 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 RNU6-1134P-201ENST00000365156 101 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 MIR34C-201ENST00000384831 77 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 RNU6-1321P-201ENST00000390905 107 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 SNORA26.2-201ENST00000390922 122 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 RNU6-1307P-201ENST00000391012 103 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PDGFAP04085 AC027119.1-201ENST00000440877 241 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 RNU7-48P-201ENST00000458875 63 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 snoU13.2-201ENST00000459201 104 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 RNA5SP445-201ENST00000515889 115 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 MIR2115-201ENST00000516657 100 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 AP000942.3-201ENST00000603702 160 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 AP000753.3-201ENST00000604083 169 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFAP04085 MIR376B-201ENST00000614515 100 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 AC105081.1-201ENST00000617727 106 ntBASIC2.21□□□□□ -2.06
PDGFAP04085 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.21□□□□□ -2.06
PDGFAP04085 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PDGFAP04085 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDGFAP04085 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PDGFAP04085 SNORA25.3-201ENST00000363205 127 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 RNA5SP456-201ENST00000364002 114 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 SNORD38.2-201ENST00000384470 69 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 RNU6-972P-201ENST00000391208 107 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 AC244023.1-201ENST00000426884 112 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 RNU6-1006P-201ENST00000516998 103 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 MIR4264-201ENST00000583520 66 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.2□□□□□ -2.06
PDGFAP04085 AC242498.1-201ENST00000604134 111 ntBASIC2.2□□□□□ -2.06
PDGFAP04085 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.2□□□□□ -2.06
PDGFAP04085 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PDGFAP04085 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
PDGFAP04085 Y_RNA.140-201ENST00000363474 103 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 MIR1302-7-201ENST00000408841 72 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 RNU6-887P-201ENST00000410660 100 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 RNY4P29-201ENST00000410801 97 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 HMGN2P23-201ENST00000456759 269 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 AL133373.1-201ENST00000497098 94 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 AC079140.2-201ENST00000506193 142 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 RNU6-762P-201ENST00000517107 102 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 AC133485.1-201ENST00000567176 124 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 AL627230.6-201ENST00000611129 280 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
PDGFAP04085 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 MIR302D-201ENST00000362275 68 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 Y_RNA.247-201ENST00000364500 92 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 Y_RNA.467-201ENST00000384297 102 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 RNU6-1065P-201ENST00000384513 106 ntBASIC2.18□□□□□ -2.06
PDGFAP04085 MIR588-201ENST00000384900 83 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms