Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.28□□□□□ -2.61
APOEP02649 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.28□□□□□ -2.61
APOEP02649 RNU6-449P-201ENST00000383914 107 ntBASIC-1.28□□□□□ -2.61
APOEP02649 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.28□□□□□ -2.61
APOEP02649 SPINT5P-201ENST00000448174 155 ntBASIC-1.28□□□□□ -2.61
APOEP02649 HAR1A.1-201ENST00000459583 118 ntBASIC-1.28□□□□□ -2.61
APOEP02649 MRPS35P2-201ENST00000508242 191 ntBASIC-1.28□□□□□ -2.61
APOEP02649 RNU6-138P-201ENST00000515952 107 ntBASIC-1.28□□□□□ -2.61
APOEP02649 IGKV1-22-201ENST00000524313 326 ntBASIC-1.28□□□□□ -2.61
APOEP02649 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.28□□□□□ -2.61
APOEP02649 MIR3920-201ENST00000581751 86 ntBASIC-1.28□□□□□ -2.61
APOEP02649 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.29□□□□□ -2.62
APOEP02649 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.29□□□□□ -2.62
APOEP02649 RNU1-141P-201ENST00000364623 158 ntBASIC-1.29□□□□□ -2.62
APOEP02649 MTND1P34-201ENST00000438556 671 ntBASIC-1.29□□□□□ -2.62
APOEP02649 AL445193.1-201ENST00000441183 141 ntBASIC-1.29□□□□□ -2.62
APOEP02649 RNU7-35P-201ENST00000517174 62 ntBASIC-1.29□□□□□ -2.62
APOEP02649 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.29□□□□□ -2.62
APOEP02649 uc_338.10-201ENST00000621872 182 ntBASIC-1.29□□□□□ -2.62
APOEP02649 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.3□□□□□ -2.62
APOEP02649 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.3□□□□□ -2.62
APOEP02649 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.3□□□□□ -2.62
APOEP02649 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.3□□□□□ -2.62
APOEP02649 MIR181A1-201ENST00000385026 110 ntBASIC-1.3□□□□□ -2.62
APOEP02649 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.3□□□□□ -2.62
APOEP02649 TRAJ51-201ENST00000504127 63 ntBASIC-1.3□□□□□ -2.62
APOEP02649 RNU6-175P-201ENST00000516896 107 ntBASIC-1.3□□□□□ -2.62
APOEP02649 MIR5197-201ENST00000583721 112 ntBASIC-1.3□□□□□ -2.62
APOEP02649 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.3□□□□□ -2.62
APOEP02649 AC048344.4-201ENST00000619744 527 ntBASIC-1.3□□□□□ -2.62
APOEP02649 RNU4-10P-201ENST00000364383 140 ntBASIC-1.31□□□□□ -2.62
APOEP02649 RNU4-70P-201ENST00000384579 139 ntBASIC-1.31□□□□□ -2.62
APOEP02649 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.31□□□□□ -2.62
APOEP02649 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.31□□□□□ -2.62
APOEP02649 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
APOEP02649 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.32□□□□□ -2.62
APOEP02649 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.32□□□□□ -2.62
APOEP02649 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.32□□□□□ -2.62
APOEP02649 RNU4-16P-201ENST00000364737 141 ntBASIC-1.32□□□□□ -2.62
APOEP02649 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.32□□□□□ -2.62
APOEP02649 MIR635-201ENST00000384830 98 ntBASIC-1.32□□□□□ -2.62
APOEP02649 RNU6-370P-201ENST00000411008 104 ntBASIC-1.32□□□□□ -2.62
APOEP02649 MTND4P17-201ENST00000470444 350 ntBASIC-1.32□□□□□ -2.62
APOEP02649 SEPT14P8-201ENST00000508026 178 ntBASIC-1.32□□□□□ -2.62
APOEP02649 AC021146.6-201ENST00000514659 117 ntBASIC-1.32□□□□□ -2.62
APOEP02649 SNORA27.4-201ENST00000516650 95 ntBASIC-1.32□□□□□ -2.62
APOEP02649 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.32□□□□□ -2.62
APOEP02649 C8orf59P2-201ENST00000603441 271 ntBASIC-1.32□□□□□ -2.62
APOEP02649 RNU7-10P-201ENST00000607194 63 ntBASIC-1.32□□□□□ -2.62
APOEP02649 RNU6-484P-201ENST00000384016 107 ntBASIC-1.33□□□□□ -2.62
APOEP02649 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.33□□□□□ -2.62
APOEP02649 MIR9-2-201ENST00000384838 87 ntBASIC-1.33□□□□□ -2.62
APOEP02649 MIR204-201ENST00000385200 110 ntBASIC-1.33□□□□□ -2.62
APOEP02649 RNU6-881P-201ENST00000516813 102 ntBASIC-1.33□□□□□ -2.62
APOEP02649 AC245505.1-201ENST00000556398 224 ntBASIC-1.33□□□□□ -2.62
APOEP02649 MIR3129-201ENST00000581095 76 ntBASIC-1.33□□□□□ -2.62
APOEP02649 AL121655.1-201ENST00000605811 308 ntBASIC-1.33□□□□□ -2.62
APOEP02649 SNORD113-5-201ENST00000607261 78 ntBASIC-1.33□□□□□ -2.62
APOEP02649 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.33□□□□□ -2.62
APOEP02649 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.34□□□□□ -2.62
APOEP02649 SNORD114-29-201ENST00000364819 70 ntBASIC-1.34□□□□□ -2.62
APOEP02649 MIR539-201ENST00000365690 78 ntBASIC-1.34□□□□□ -2.62
APOEP02649 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.34□□□□□ -2.62
APOEP02649 AL603914.1-201ENST00000401964 204 ntBASIC-1.34□□□□□ -2.62
APOEP02649 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.34□□□□□ -2.62
APOEP02649 AC099799.1-201ENST00000439809 192 ntBASIC-1.34□□□□□ -2.62
APOEP02649 AC097635.1-201ENST00000450678 155 ntBASIC-1.34□□□□□ -2.62
APOEP02649 SCARNA17-201ENST00000516183 144 ntBASIC-1.34□□□□□ -2.62
APOEP02649 AC098479.1-201ENST00000609225 154 ntBASIC-1.34□□□□□ -2.62
APOEP02649 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.35□□□□□ -2.63
APOEP02649 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU6-30P-201ENST00000384561 107 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU6-429P-201ENST00000384582 108 ntBASIC-1.35□□□□□ -2.63
APOEP02649 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.35□□□□□ -2.63
APOEP02649 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.35□□□□□ -2.63
APOEP02649 PMCHL1-202ENST00000423102 261 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU7-74P-201ENST00000459104 62 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU6-507P-201ENST00000516045 100 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU7-13P-201ENST00000516413 62 ntBASIC-1.35□□□□□ -2.63
APOEP02649 RNU7-137P-201ENST00000516788 62 ntBASIC-1.35□□□□□ -2.63
APOEP02649 YWHAEP2-201ENST00000580066 112 ntBASIC-1.35□□□□□ -2.63
APOEP02649 AC007485.1-201ENST00000616755 206 ntBASIC-1.35□□□□□ -2.63
APOEP02649 MIR4272-201ENST00000635924 64 ntBASIC-1.35□□□□□ -2.63
APOEP02649 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.36□□□□□ -2.63
APOEP02649 MIR559-201ENST00000385188 96 ntBASIC-1.36□□□□□ -2.63
APOEP02649 MIR526A2-201ENST00000390198 65 ntBASIC-1.36□□□□□ -2.63
APOEP02649 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.36□□□□□ -2.63
APOEP02649 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.36□□□□□ -2.63
APOEP02649 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.36□□□□□ -2.63
APOEP02649 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.36□□□□□ -2.63
APOEP02649 SNORD67.1-201ENST00000516618 108 ntBASIC-1.36□□□□□ -2.63
APOEP02649 MIR548AE1-201ENST00000583292 70 ntBASIC-1.36□□□□□ -2.63
APOEP02649 RNU4-36P-201ENST00000364294 144 ntBASIC-1.37□□□□□ -2.63
APOEP02649 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.37□□□□□ -2.63
APOEP02649 SNORA32-201ENST00000384072 121 ntBASIC-1.37□□□□□ -2.63
APOEP02649 SNORA53-201ENST00000391141 249 ntBASIC-1.37□□□□□ -2.63
APOEP02649 MTATP6P23-201ENST00000440153 476 ntBASIC-1.37□□□□□ -2.63
APOEP02649 RNU6-893P-201ENST00000458841 100 ntBASIC-1.37□□□□□ -2.63
APOEP02649 RNA5SP153-201ENST00000516498 76 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms