Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC098479.1-201ENST00000609225 154 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 RNU6-54P-201ENST00000365563 107 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 MIR517A-201ENST00000385001 87 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 RNU6-592P-201ENST00000411333 103 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 AC068339.1-201ENST00000526965 141 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 MIR4500-201ENST00000579472 76 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 MIR4464-201ENST00000580818 92 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 MIR4999-201ENST00000585029 91 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 AL049861.1-201ENST00000603130 150 ntBASIC-1.24□□□□□ -2.61
SPTA1P02549 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.24□□□□□ -2.61
SPTA1P02549 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 AL603914.1-201ENST00000401964 204 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 AL353691.2-201ENST00000443795 59 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 AC100767.1-201ENST00000528178 123 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 RNU6-595P-201ENST00000363944 107 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 AL606845.1-201ENST00000404881 255 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 RNU2-66P-201ENST00000410650 161 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 RNU6-893P-201ENST00000458841 100 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 SERF1AP1-201ENST00000514575 187 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.25□□□□□ -2.61
SPTA1P02549 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 SNORD115-27-201ENST00000364430 82 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 RNU6-413P-201ENST00000384115 107 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 RNU6-906P-201ENST00000384700 70 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 RNU7-87P-201ENST00000459343 62 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 AC006386.1-201ENST00000619436 415 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 SNORA2.1-201ENST00000363089 137 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 SNORA72.4-201ENST00000384174 132 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.26□□□□□ -2.61
SPTA1P02549 MTND3P1-201ENST00000441336 220 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 RNU7-66P-201ENST00000459469 62 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 AC021443.1-201ENST00000604478 211 ntBASIC-1.26□□□□□ -2.61
SPTA1P02549 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 SNORD113-7-201ENST00000363762 77 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 RNU6-899P-201ENST00000363947 107 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 RNU6-746P-201ENST00000384112 109 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 SNORA26.4-201ENST00000391188 123 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 AL078595.1-201ENST00000404458 226 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 AL593851.1-201ENST00000426171 157 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 MIR5188-201ENST00000583467 113 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 AC124303.1-201ENST00000605703 360 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 RNU6-332P-201ENST00000391193 108 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 RNU7-195P-201ENST00000458793 62 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 AC024909.2-201ENST00000553035 286 ntBASIC-1.27□□□□□ -2.61
SPTA1P02549 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 RNY3P4-201ENST00000384428 101 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 MIR516A2-201ENST00000384888 90 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 MIR516A1-201ENST00000385033 90 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 MIR548E-201ENST00000408287 88 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.28□□□□□ -2.61
SPTA1P02549 RNU7-115P-201ENST00000516433 55 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.28□□□□□ -2.61
SPTA1P02549 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 RNU6-235P-201ENST00000362644 107 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 RNU6-254P-201ENST00000363377 107 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 MIR1270-201ENST00000459320 83 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 RNU6-759P-201ENST00000516740 103 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 MTATP6P24-201ENST00000576835 677 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 AC006927.3-201ENST00000638789 384 ntBASIC-1.28□□□□□ -2.61
SPTA1P02549 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 MIR519A1-201ENST00000385257 85 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 U6.100-201ENST00000636230 99 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 RNU6-660P-201ENST00000364566 109 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 SNORD5.1-201ENST00000458800 75 ntBASIC-1.29□□□□□ -2.62
SPTA1P02549 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU2-55P-201ENST00000411146 174 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU7-137P-201ENST00000516788 62 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU6-453P-201ENST00000516819 85 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 MIR6874-201ENST00000635894 71 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 SNORD115-20-201ENST00000365099 82 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU6-128P-201ENST00000383976 107 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 AL160004.2-201ENST00000432935 350 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 AL356010.1-201ENST00000456364 102 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 RNU6-276P-201ENST00000516114 96 ntBASIC-1.3□□□□□ -2.62
SPTA1P02549 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms