Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MIR548I2-201ENST00000408348 149 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 RNU6-648P-201ENST00000410190 107 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 SNORD63B-201ENST00000411005 70 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 MTND4P28-201ENST00000426217 387 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 SNORD67.1-201ENST00000516618 108 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 RNU1-54P-201ENST00000517181 120 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 MIR4500-201ENST00000579472 76 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.93□□□□□ -2.72
SIX6O95475 MIR6502-201ENST00000617296 76 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 snoR1.1-201ENST00000628177 80 ntBASIC-1.93□□□□□ -2.72
SIX6O95475 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 RNU6-308P-201ENST00000390957 107 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 RNU6-383P-201ENST00000410864 94 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 SNORD5.1-201ENST00000458800 75 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 AC245505.1-201ENST00000556398 224 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 MIR4441-201ENST00000582623 100 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 MIR6818-201ENST00000621576 65 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 MIR376A2-201ENST00000636782 80 ntBASIC-1.94□□□□□ -2.72
SIX6O95475 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 SNORD114-10-201ENST00000363409 72 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 MIR548K-201ENST00000408406 116 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 MIR4520-1-201ENST00000582609 70 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 AL008718.3-201ENST00000610217 321 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 AC099654.14-201ENST00000638599 341 ntBASIC-1.95□□□□□ -2.72
SIX6O95475 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 RNU6-144P-201ENST00000383951 107 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 SNORD78.2-201ENST00000391076 69 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 RNU2-66P-201ENST00000410650 161 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 AC097510.1-201ENST00000510945 133 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 AC107027.2-201ENST00000512197 115 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 MIR3145-201ENST00000580727 82 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 AL359881.1-201ENST00000602916 267 ntBASIC-1.96□□□□□ -2.72
SIX6O95475 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 RNU6-801P-201ENST00000364087 105 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 RNU6-484P-201ENST00000384016 107 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 MIR124-2-201ENST00000385081 109 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 MTND2P31-201ENST00000512602 616 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 RNU6-835P-201ENST00000516974 104 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 AC145350.1-201ENST00000567426 208 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 MIR1244-1-201ENST00000612829 85 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 MIR1244-3-201ENST00000635744 85 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 MIR1244-2-201ENST00000636449 85 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 MIR1244-4-202ENST00000636813 85 ntBASIC-1.97□□□□□ -2.72
SIX6O95475 SNORD81.1-201ENST00000363064 77 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 MIR582-201ENST00000365731 98 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 SNORA32-201ENST00000384072 121 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 RNU6-576P-201ENST00000390854 102 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 AC021146.9-201ENST00000512503 156 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 RNU6-311P-201ENST00000516224 102 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 AC068339.1-201ENST00000526965 141 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 YWHAEP3-201ENST00000582767 121 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 AL669831.3-213ENST00000636676 183 ntBASIC-1.98□□□□□ -2.73
SIX6O95475 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 RNU6-899P-201ENST00000363947 107 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 SNORD115-23-201ENST00000364461 82 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.99□□□□□ -2.73
SIX6O95475 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.99□□□□□ -2.73
SIX6O95475 MIR2053-201ENST00000459295 91 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 RNU6-397P-201ENST00000516226 104 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 RNU6-287P-201ENST00000516230 98 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 MIR5197-201ENST00000583721 112 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 MIR6128-201ENST00000615528 109 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 AF246928.1-201ENST00000623768 87 ntBASIC-1.99□□□□□ -2.73
SIX6O95475 RNU6-170P-201ENST00000362832 104 ntBASIC-2□□□□□ -2.73
SIX6O95475 Y_RNA.304-201ENST00000365011 112 ntBASIC-2□□□□□ -2.73
SIX6O95475 RNU6-1130P-201ENST00000365434 107 ntBASIC-2□□□□□ -2.73
SIX6O95475 Y_RNA.470-201ENST00000384307 117 ntBASIC-2□□□□□ -2.73
SIX6O95475 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-2□□□□□ -2.73
SIX6O95475 AC060788.1-201ENST00000521318 469 ntBASIC-2□□□□□ -2.73
SIX6O95475 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 RNY3P4-201ENST00000384428 101 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 MIR1468-201ENST00000410600 86 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 MIR4659A-201ENST00000580269 81 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 AC040904.1-201ENST00000590850 223 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 AL353803.5-201ENST00000599815 141 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 AC092794.2-201ENST00000620933 563 ntBASIC-2.01□□□□□ -2.73
SIX6O95475 MIR367-201ENST00000362299 68 ntBASIC-2.02□□□□□ -2.73
SIX6O95475 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.02□□□□□ -2.73
SIX6O95475 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.02□□□□□ -2.73
SIX6O95475 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.02□□□□□ -2.73
SIX6O95475 RNU2-51P-201ENST00000410708 197 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms