Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-609P-201ENST00000365459 107 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 RNU6-114P-201ENST00000384704 105 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MIR548Q-201ENST00000408404 100 ntBASIC-1.02□□□□□ -2.57
USH2AO75445 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
USH2AO75445 AC109479.2-201ENST00000517842 174 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 SNORA27-201ENST00000384323 126 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.03□□□□□ -2.57
USH2AO75445 MTND4P18-201ENST00000447010 465 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 AC079140.5-201ENST00000507882 310 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.03□□□□□ -2.57
USH2AO75445 AL157392.4-201ENST00000609756 345 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 AC022616.4-201ENST00000522985 181 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 FRG2DP-202ENST00000566967 323 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 AC090615.1-201ENST00000577519 154 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.03□□□□□ -2.57
USH2AO75445 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.03□□□□□ -2.58
USH2AO75445 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.03□□□□□ -2.58
USH2AO75445 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.03□□□□□ -2.58
USH2AO75445 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.03□□□□□ -2.58
USH2AO75445 ACA59.1-201ENST00000515966 143 ntBASIC-1.03□□□□□ -2.58
USH2AO75445 AC124864.2-201ENST00000624736 186 ntBASIC-1.03□□□□□ -2.58
USH2AO75445 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.03□□□□□ -2.58
USH2AO75445 SNORA27.2-201ENST00000363365 126 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 MIR122-201ENST00000385044 85 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.04□□□□□ -2.58
USH2AO75445 MTATP6P21-201ENST00000440681 189 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-430P-201ENST00000517078 107 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 AC124303.1-201ENST00000605703 360 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 SNORD114-10-201ENST00000363409 72 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 SNORA69-201ENST00000383895 132 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-995P-201ENST00000391244 107 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 AC007671.2-201ENST00000637344 619 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-832P-201ENST00000363319 107 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-527P-201ENST00000363425 104 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-481P-201ENST00000384194 107 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 SNORA20B-201ENST00000384220 132 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 SNORA40.5-201ENST00000391061 128 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU6-998P-201ENST00000515894 101 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 RNU7-151P-201ENST00000516930 53 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 U6.96-201ENST00000636425 70 ntBASIC-1.04□□□□□ -2.58
USH2AO75445 TPTE2P1-204ENST00000435256 593 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 VN1R91P-201ENST00000594377 169 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 MIR302B-201ENST00000362188 73 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-117P-201ENST00000365415 107 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 SNORD116-23-201ENST00000384645 92 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU7-96P-201ENST00000459535 64 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-268P-201ENST00000364174 107 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-361P-201ENST00000364454 107 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-645P-201ENST00000364649 106 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNY1P13-201ENST00000365030 105 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 MIR519A2-201ENST00000384990 87 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-822P-201ENST00000362707 106 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 RNU6-68P-201ENST00000516576 104 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 MTND1P5-201ENST00000517906 940 ntBASIC-1.05□□□□□ -2.58
USH2AO75445 SNORA27.1-201ENST00000362604 124 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 RNU6-282P-201ENST00000365357 103 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 RNU6-108P-201ENST00000365558 107 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 MIR203A-201ENST00000384836 110 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 AC119751.4-201ENST00000507498 357 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 SNORA63-201ENST00000363450 132 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 RNU6-167P-201ENST00000384292 106 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 RNU2-28P-201ENST00000410457 189 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 AC022878.1-201ENST00000530684 149 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 MIR1255B2-201ENST00000408618 67 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 MIR2113-201ENST00000459007 91 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 AC124312.5-201ENST00000604451 268 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 RNU6-874P-201ENST00000362390 105 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 RNY1P12-201ENST00000364251 105 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 SNORD101-201ENST00000384027 73 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 AL033528.1-201ENST00000453780 140 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 SNRPGP7-201ENST00000469016 106 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 AC245297.2-201ENST00000610119 565 ntBASIC-1.06□□□□□ -2.58
USH2AO75445 SNORD87-201ENST00000364849 89 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 SNORA20.2-201ENST00000383922 131 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 RNU6-458P-201ENST00000384179 107 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 AL031003.1-201ENST00000404229 172 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 SNORD63B-201ENST00000411005 70 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 RNU7-88P-201ENST00000458752 63 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 SNORD116-25-201ENST00000516517 92 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 RNU7-116P-201ENST00000516940 62 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 PIGPP4-201ENST00000584447 307 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 1401.8 ms