Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
TRIM13O60858 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM13O60858 Y_RNA.545-201ENST00000384652 105 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 NDUFB4P4-201ENST00000404822 243 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 SPINT5P-201ENST00000448174 155 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 AC093850.1-201ENST00000454121 251 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 snoU13.16-201ENST00000459350 104 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 RNU7-137P-201ENST00000516788 62 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 U7.4-201ENST00000614961 63 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 U1.36-201ENST00000620684 176 ntBASIC2.12□□□□□ -2.07
TRIM13O60858 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM13O60858 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.11□□□□□ -2.07
TRIM13O60858 SNORD114-10-201ENST00000363409 72 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-301P-201ENST00000384277 107 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 MIR526A1-201ENST00000384897 85 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 MIR181B2-201ENST00000385004 89 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-447P-201ENST00000410293 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-1118P-201ENST00000410382 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-1076P-201ENST00000410397 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-355P-201ENST00000410427 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-791P-201ENST00000410467 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-705P-201ENST00000410601 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-1100P-201ENST00000410691 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-860P-201ENST00000410860 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-1217P-201ENST00000411276 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU6-785P-201ENST00000411324 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNVU1-2-201ENST00000516326 135 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 SNORD53-201ENST00000579969 78 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 FAM106DP-201ENST00000586416 501 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 U6.90-201ENST00000614007 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 AC012676.2-201ENST00000619258 186 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 U6.70-201ENST00000620287 104 ntBASIC2.11□□□□□ -2.07
TRIM13O60858 SNORD38.2-201ENST00000384470 69 ntBASIC2.1□□□□□ -2.07
TRIM13O60858 RNU6-1086P-201ENST00000410930 100 ntBASIC2.1□□□□□ -2.07
TRIM13O60858 AC004223.1-201ENST00000479840 271 ntBASIC2.1□□□□□ -2.07
TRIM13O60858 RNU7-79P-201ENST00000516082 62 ntBASIC2.1□□□□□ -2.07
TRIM13O60858 Z97988.1-201ENST00000637697 135 ntBASIC2.1□□□□□ -2.07
TRIM13O60858 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRIM13O60858 RNU6-478P-201ENST00000363904 110 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNU6-480P-201ENST00000384332 107 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 SNORA2B-201ENST00000384583 137 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 MIR520A-201ENST00000384862 85 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNU6-129P-201ENST00000391022 107 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNU6-519P-201ENST00000410590 108 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNA5SP501-201ENST00000410990 112 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 AC087499.7-201ENST00000441958 109 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 RNU7-48P-201ENST00000458875 63 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 AC114801.3-201ENST00000510231 177 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 SCARNA16.3-201ENST00000516595 184 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 SUB1P4-201ENST00000566062 339 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 AC105081.1-201ENST00000617727 106 ntBASIC2.09□□□□□ -2.07
TRIM13O60858 Y_RNA.98-201ENST00000363109 102 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 RNA5SP133-201ENST00000363368 119 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 SNORA5B-201ENST00000363786 132 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 Y_RNA.354-201ENST00000365448 111 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 RNU6-602P-201ENST00000411155 105 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 RNU6-523P-201ENST00000516304 54 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 RNU7-153P-201ENST00000516455 62 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 AL513423.1-201ENST00000621695 132 ntBASIC2.08□□□□□ -2.08
TRIM13O60858 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM13O60858 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TRIM13O60858 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 RNU6-590P-201ENST00000365039 107 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 RNU2-7P-201ENST00000410794 178 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 SNORA25.13-201ENST00000516395 103 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 MTND5P40-201ENST00000559945 246 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 AC021506.2-201ENST00000612354 169 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 AP001362.1-201ENST00000625165 124 ntBASIC2.07□□□□□ -2.08
TRIM13O60858 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRIM13O60858 AC131280.1-202ENST00000624067 4211 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 HSBP1P2-201ENST00000299671 229 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 Y_RNA.57-201ENST00000362806 113 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 Y_RNA.168-201ENST00000363740 102 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 MIR660-201ENST00000385235 97 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 MIR1236-201ENST00000408340 102 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 RNU2-19P-201ENST00000517288 84 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 Y_RNA.788-201ENST00000622394 112 ntBASIC2.06□□□□□ -2.08
TRIM13O60858 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRIM13O60858 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TRIM13O60858 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM13O60858 RNU6-1094P-201ENST00000362416 104 ntBASIC2.05□□□□□ -2.08
TRIM13O60858 RNU6-624P-201ENST00000363411 107 ntBASIC2.05□□□□□ -2.08
TRIM13O60858 RNU6-112P-201ENST00000363599 104 ntBASIC2.05□□□□□ -2.08
TRIM13O60858 RNU6-525P-201ENST00000363685 104 ntBASIC2.05□□□□□ -2.08
TRIM13O60858 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRIM13O60858 AC099513.1-201ENST00000490423 301 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms