Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORD113-1-201ENST00000365321 69 ntBASIC1.18□□□□□ -2.22
LDB2O43679 AL022718.1-201ENST00000412004 84 ntBASIC1.18□□□□□ -2.22
LDB2O43679 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
LDB2O43679 RNU7-164P-201ENST00000459221 62 ntBASIC1.18□□□□□ -2.22
LDB2O43679 RN7SKP19-201ENST00000516016 252 ntBASIC1.18□□□□□ -2.22
LDB2O43679 RNA5SP102-201ENST00000516865 106 ntBASIC1.18□□□□□ -2.22
LDB2O43679 Y_RNA.71-201ENST00000362892 104 ntBASIC1.17□□□□□ -2.22
LDB2O43679 MT-TN-201ENST00000387400 73 ntBASIC1.17□□□□□ -2.22
LDB2O43679 MIR1276-201ENST00000408707 83 ntBASIC1.17□□□□□ -2.22
LDB2O43679 MIR4264-201ENST00000583520 66 ntBASIC1.17□□□□□ -2.22
LDB2O43679 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.17□□□□□ -2.22
LDB2O43679 SEPT14P17-201ENST00000617978 177 ntBASIC1.17□□□□□ -2.22
LDB2O43679 MIR6516-201ENST00000630554 81 ntBASIC1.17□□□□□ -2.22
LDB2O43679 Y_RNA.298-201ENST00000364960 107 ntBASIC1.16□□□□□ -2.22
LDB2O43679 Y_RNA.363-201ENST00000365529 113 ntBASIC1.16□□□□□ -2.22
LDB2O43679 SNORD116-14-201ENST00000383894 92 ntBASIC1.16□□□□□ -2.22
LDB2O43679 SNORD116-17-201ENST00000383929 92 ntBASIC1.16□□□□□ -2.22
LDB2O43679 SNORD116-15-201ENST00000384445 92 ntBASIC1.16□□□□□ -2.22
LDB2O43679 SNORD116-19-201ENST00000384729 92 ntBASIC1.16□□□□□ -2.22
LDB2O43679 RNU6-910P-201ENST00000390844 107 ntBASIC1.16□□□□□ -2.22
LDB2O43679 RNU6-613P-201ENST00000410412 108 ntBASIC1.16□□□□□ -2.22
LDB2O43679 RNU7-123P-201ENST00000515911 60 ntBASIC1.16□□□□□ -2.22
LDB2O43679 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
LDB2O43679 RNU2-35P-201ENST00000516446 142 ntBASIC1.16□□□□□ -2.22
LDB2O43679 RNY4P20-201ENST00000516678 93 ntBASIC1.16□□□□□ -2.22
LDB2O43679 IGKV1-22-201ENST00000524313 326 ntBASIC1.16□□□□□ -2.22
LDB2O43679 AP000753.3-201ENST00000604083 169 ntBASIC1.16□□□□□ -2.22
LDB2O43679 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
LDB2O43679 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.23
LDB2O43679 MIR377-201ENST00000362145 69 ntBASIC1.15□□□□□ -2.23
LDB2O43679 SNORD58C-201ENST00000365223 64 ntBASIC1.15□□□□□ -2.23
LDB2O43679 SNORA80D-201ENST00000384488 135 ntBASIC1.15□□□□□ -2.23
LDB2O43679 RNU6-1117P-201ENST00000384525 104 ntBASIC1.15□□□□□ -2.23
LDB2O43679 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
LDB2O43679 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
LDB2O43679 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
LDB2O43679 RNA5SP136-201ENST00000410906 107 ntBASIC1.15□□□□□ -2.23
LDB2O43679 AL591704.2-201ENST00000421658 181 ntBASIC1.15□□□□□ -2.23
LDB2O43679 RNU6-772P-201ENST00000516042 105 ntBASIC1.15□□□□□ -2.23
LDB2O43679 RNU6-1234P-201ENST00000516877 103 ntBASIC1.15□□□□□ -2.23
LDB2O43679 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
LDB2O43679 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
LDB2O43679 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.15□□□□□ -2.23
LDB2O43679 Y_RNA.127-201ENST00000363386 109 ntBASIC1.14□□□□□ -2.23
LDB2O43679 Y_RNA.191-201ENST00000363972 113 ntBASIC1.14□□□□□ -2.23
LDB2O43679 RNU6-654P-201ENST00000364373 107 ntBASIC1.14□□□□□ -2.23
LDB2O43679 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
LDB2O43679 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.14□□□□□ -2.23
LDB2O43679 AC244023.1-201ENST00000426884 112 ntBASIC1.14□□□□□ -2.23
LDB2O43679 AC008267.6-201ENST00000441664 139 ntBASIC1.14□□□□□ -2.23
LDB2O43679 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.14□□□□□ -2.23
LDB2O43679 RNU7-113P-201ENST00000459273 62 ntBASIC1.14□□□□□ -2.23
LDB2O43679 AC113410.1-201ENST00000505029 247 ntBASIC1.14□□□□□ -2.23
LDB2O43679 SNORD79.1-201ENST00000516069 84 ntBASIC1.14□□□□□ -2.23
LDB2O43679 RNU6-781P-201ENST00000516377 101 ntBASIC1.14□□□□□ -2.23
LDB2O43679 RNU6-1061P-201ENST00000516530 99 ntBASIC1.14□□□□□ -2.23
LDB2O43679 RNU6-1258P-201ENST00000516911 111 ntBASIC1.14□□□□□ -2.23
LDB2O43679 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.14□□□□□ -2.23
LDB2O43679 AC242498.1-201ENST00000604134 111 ntBASIC1.14□□□□□ -2.23
LDB2O43679 AL157777.2-201ENST00000258070 137 ntBASIC1.13□□□□□ -2.23
LDB2O43679 SNORD115-2-201ENST00000362842 82 ntBASIC1.13□□□□□ -2.23
LDB2O43679 Y_RNA.171-201ENST00000363760 102 ntBASIC1.13□□□□□ -2.23
LDB2O43679 SNORD115-20-201ENST00000365099 82 ntBASIC1.13□□□□□ -2.23
LDB2O43679 Y_RNA.531-201ENST00000384589 121 ntBASIC1.13□□□□□ -2.23
LDB2O43679 MIRLET7F2-201ENST00000385277 83 ntBASIC1.13□□□□□ -2.23
LDB2O43679 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
LDB2O43679 RNU7-107P-201ENST00000459121 61 ntBASIC1.13□□□□□ -2.23
LDB2O43679 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
LDB2O43679 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
LDB2O43679 RNU6-659P-201ENST00000516454 104 ntBASIC1.13□□□□□ -2.23
LDB2O43679 RNU6-62P-201ENST00000516526 102 ntBASIC1.13□□□□□ -2.23
LDB2O43679 Y_RNA.712-201ENST00000517011 92 ntBASIC1.13□□□□□ -2.23
LDB2O43679 AC004812.1-201ENST00000540773 146 ntBASIC1.13□□□□□ -2.23
LDB2O43679 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LDB2O43679 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LDB2O43679 RNA5SP327-201ENST00000362494 101 ntBASIC1.12□□□□□ -2.23
LDB2O43679 Y_RNA.330-201ENST00000365230 109 ntBASIC1.12□□□□□ -2.23
LDB2O43679 RNU6-22P-201ENST00000384355 107 ntBASIC1.12□□□□□ -2.23
LDB2O43679 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
LDB2O43679 SNORD12C-201ENST00000386307 89 ntBASIC1.12□□□□□ -2.23
LDB2O43679 MIR1263-201ENST00000408324 86 ntBASIC1.12□□□□□ -2.23
LDB2O43679 AL512326.2-201ENST00000426359 151 ntBASIC1.12□□□□□ -2.23
LDB2O43679 RNU6-1333P-201ENST00000516162 93 ntBASIC1.12□□□□□ -2.23
LDB2O43679 MIR4452-201ENST00000583004 71 ntBASIC1.12□□□□□ -2.23
LDB2O43679 AC025166.1-201ENST00000612411 163 ntBASIC1.12□□□□□ -2.23
LDB2O43679 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
LDB2O43679 Y_RNA.168-201ENST00000363740 102 ntBASIC1.11□□□□□ -2.23
LDB2O43679 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
LDB2O43679 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
LDB2O43679 SNORA19-201ENST00000384737 128 ntBASIC1.11□□□□□ -2.23
LDB2O43679 RNU6-205P-201ENST00000390858 107 ntBASIC1.11□□□□□ -2.23
LDB2O43679 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
LDB2O43679 AL606753.1-201ENST00000427435 87 ntBASIC1.11□□□□□ -2.23
LDB2O43679 snoU13.2-201ENST00000459201 104 ntBASIC1.11□□□□□ -2.23
LDB2O43679 RNU7-90P-201ENST00000459216 62 ntBASIC1.11□□□□□ -2.23
LDB2O43679 COX6CP6-201ENST00000490840 228 ntBASIC1.11□□□□□ -2.23
LDB2O43679 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
LDB2O43679 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
LDB2O43679 RNU6-580P-201ENST00000365159 107 ntBASIC1.1□□□□□ -2.23
LDB2O43679 Y_RNA.470-201ENST00000384307 117 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 252.7 ms