Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU7-164P-201ENST00000459221 62 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 AC132825.6-201ENST00000638861 357 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PHGDHO43175 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
PHGDHO43175 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 MIR378A-201ENST00000362177 66 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 RNU6-647P-201ENST00000364243 107 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 RNU6-1104P-201ENST00000384723 104 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 MIR1263-201ENST00000408324 86 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 Y_RNA.617-201ENST00000410920 90 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 RNU6-893P-201ENST00000458841 100 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 RNU6-1061P-201ENST00000516530 99 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.29□□□□□ -2.2
PHGDHO43175 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
PHGDHO43175 RNA5SP432-201ENST00000362480 116 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 Y_RNA.470-201ENST00000384307 117 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 SNORA17.3-201ENST00000391159 129 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 Y_RNA.630-201ENST00000411370 108 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 RNU7-123P-201ENST00000515911 60 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 AC036111.3-201ENST00000526389 112 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 AC022523.2-201ENST00000561045 150 ntBASIC1.28□□□□□ -2.2
PHGDHO43175 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
PHGDHO43175 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 Y_RNA.261-201ENST00000364631 102 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 Y_RNA.298-201ENST00000364960 107 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNU6-1237P-201ENST00000384777 107 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNU4-62P-201ENST00000410125 130 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 AL022718.1-201ENST00000412004 84 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 AL606753.1-201ENST00000427435 87 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNU7-62P-201ENST00000458856 62 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNU6-406P-201ENST00000516470 107 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNY4P20-201ENST00000516678 93 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 AC004812.1-201ENST00000540773 146 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 MIR4781-201ENST00000585250 76 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 AL365222.1-201ENST00000614661 98 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 AC106800.4-201ENST00000614905 153 ntBASIC1.27□□□□□ -2.21
PHGDHO43175 RNU6-80P-201ENST00000384195 107 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 MIR19B1-201ENST00000384829 87 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 MT-TI-201ENST00000387365 69 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.26□□□□□ -2.21
PHGDHO43175 RNU6-789P-201ENST00000517105 102 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 uc_338.6-201ENST00000613544 171 ntBASIC1.26□□□□□ -2.21
PHGDHO43175 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
PHGDHO43175 RNU6-342P-201ENST00000384521 104 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 Y_RNA.531-201ENST00000384589 121 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 SNORA19-201ENST00000384737 128 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 MIR588-201ENST00000384900 83 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
PHGDHO43175 RNU7-113P-201ENST00000459273 62 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 RNU6-772P-201ENST00000516042 105 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.25□□□□□ -2.21
PHGDHO43175 MIR6740-201ENST00000618268 113 ntBASIC1.25□□□□□ -2.21
PHGDHO43175 RNU6-580P-201ENST00000365159 107 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 AP1B1P2-201ENST00000416196 106 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 BTF3P4-201ENST00000418852 495 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 RNU7-95P-201ENST00000459222 64 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 snoU13.21-201ENST00000459368 105 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 RNU6-659P-201ENST00000516454 104 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.24□□□□□ -2.21
PHGDHO43175 RNU6-94P-201ENST00000607728 107 ntBASIC1.24□□□□□ -2.21
PHGDHO43175 SNORD58C-201ENST00000365223 64 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 AC113410.1-201ENST00000505029 247 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 RNU6-1333P-201ENST00000516162 93 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 RNA5SP33-201ENST00000516687 98 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
PHGDHO43175 Y_RNA.127-201ENST00000363386 109 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORA7.1-201ENST00000363750 139 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORD116-14-201ENST00000383894 92 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORD116-17-201ENST00000383929 92 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORA32-201ENST00000384072 121 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORD116-15-201ENST00000384445 92 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 Y_RNA.528-201ENST00000384575 108 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORD116-19-201ENST00000384729 92 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 snoU13.31-201ENST00000607291 104 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 AC025166.1-201ENST00000612411 163 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 U2.22-201ENST00000636441 106 ntBASIC1.22□□□□□ -2.21
PHGDHO43175 SNORD115-2-201ENST00000362842 82 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 SNORD115-20-201ENST00000365099 82 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 RNU6-22P-201ENST00000384355 107 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 SNORA18-201ENST00000384416 132 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
PHGDHO43175 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms