Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.36□□□□□ -2.79
CHD1O14646 RNU6-254P-201ENST00000363377 107 ntBASIC-2.37□□□□□ -2.79
CHD1O14646 MIR548I2-201ENST00000408348 149 ntBASIC-2.37□□□□□ -2.79
CHD1O14646 RNU6-626P-201ENST00000363354 107 ntBASIC-2.37□□□□□ -2.79
CHD1O14646 SNORD114-4-201ENST00000363962 75 ntBASIC-2.37□□□□□ -2.79
CHD1O14646 SNORD42A-201ENST00000459584 64 ntBASIC-2.37□□□□□ -2.79
CHD1O14646 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.38□□□□□ -2.79
CHD1O14646 Y_RNA.366-201ENST00000365540 102 ntBASIC-2.38□□□□□ -2.79
CHD1O14646 SNORA40.3-201ENST00000390964 122 ntBASIC-2.38□□□□□ -2.79
CHD1O14646 AF228730.4-201ENST00000421457 183 ntBASIC-2.38□□□□□ -2.79
CHD1O14646 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-2.39□□□□□ -2.79
CHD1O14646 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-2.39□□□□□ -2.79
CHD1O14646 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-2.39□□□□□ -2.79
CHD1O14646 MTND3P16-201ENST00000452205 344 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 RNU6-155P-201ENST00000516347 100 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 AC060780.3-201ENST00000589464 80 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 AL008718.3-201ENST00000610217 321 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 SNORD114-10-201ENST00000363409 72 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 Y_RNA.159-201ENST00000363674 87 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.39□□□□□ -2.79
CHD1O14646 RNU6-1301P-201ENST00000362724 104 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 Y_RNA.486-201ENST00000384398 107 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 RNU6-1242P-201ENST00000391052 103 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 SNORD115-47-201ENST00000391226 86 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 MIR2113-201ENST00000459007 91 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 AC245505.1-201ENST00000556398 224 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 MIR4662B-201ENST00000579498 81 ntBASIC-2.4□□□□□ -2.79
CHD1O14646 RNU6-500P-201ENST00000362349 107 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 RNU6-282P-201ENST00000365357 103 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 SNORA62.4-201ENST00000365504 151 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 RNU6-144P-201ENST00000383951 107 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 SNORD61-201ENST00000384252 73 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 MT-TM-201ENST00000387377 68 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 MIR216B-201ENST00000390186 82 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 RNU7-195P-201ENST00000458793 62 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-2.41□□□□□ -2.8
CHD1O14646 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.41□□□□□ -2.8
CHD1O14646 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.42□□□□□ -2.8
CHD1O14646 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.42□□□□□ -2.8
CHD1O14646 RNU6-38P-201ENST00000384085 107 ntBASIC-2.42□□□□□ -2.8
CHD1O14646 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.42□□□□□ -2.8
CHD1O14646 RNA5SP401-201ENST00000515920 127 ntBASIC-2.42□□□□□ -2.8
CHD1O14646 AC024933.1-201ENST00000608472 348 ntBASIC-2.42□□□□□ -2.8
CHD1O14646 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 RNU6-164P-201ENST00000364604 103 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 Y_RNA.454-201ENST00000384224 113 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 RNU6-592P-201ENST00000411333 103 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 AL160004.2-201ENST00000432935 350 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.43□□□□□ -2.8
CHD1O14646 snoU109.3-201ENST00000459477 145 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 MIR4756-201ENST00000577874 78 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 MIR4308-201ENST00000580634 81 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-2.43□□□□□ -2.8
CHD1O14646 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.44□□□□□ -2.8
CHD1O14646 RNU6-524P-201ENST00000384270 107 ntBASIC-2.44□□□□□ -2.8
CHD1O14646 UBE2V1P12-201ENST00000503954 474 ntBASIC-2.44□□□□□ -2.8
CHD1O14646 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.44□□□□□ -2.8
CHD1O14646 AC091951.2-201ENST00000500762 203 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 MTATP6P24-201ENST00000576835 677 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 AC098479.1-201ENST00000609225 154 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 AC091932.4-201ENST00000623386 200 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 SNORA22.1-201ENST00000362701 134 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 RNU6-801P-201ENST00000364087 105 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 MIR519A1-201ENST00000385257 85 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 SNORD37.1-201ENST00000390968 65 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 AL078595.1-201ENST00000404458 226 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 RNU7-141P-201ENST00000459304 62 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 AL118558.2-201ENST00000556294 238 ntBASIC-2.45□□□□□ -2.8
CHD1O14646 RNU2-51P-201ENST00000410708 197 ntBASIC-2.46□□□□□ -2.8
CHD1O14646 AC060788.1-201ENST00000521318 469 ntBASIC-2.46□□□□□ -2.8
CHD1O14646 AL669831.3-213ENST00000636676 183 ntBASIC-2.46□□□□□ -2.8
CHD1O14646 RNU6-888P-201ENST00000363010 101 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 RNU6-636P-201ENST00000384598 107 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 SNORA53-201ENST00000391141 249 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 SNORD63B-201ENST00000411005 70 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-2.47□□□□□ -2.8
CHD1O14646 RNU2-31P-201ENST00000516954 155 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 AC068339.1-201ENST00000526965 141 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 AC024909.2-201ENST00000553035 286 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 AC005014.3-201ENST00000605985 190 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 MIR6874-201ENST00000635894 71 ntBASIC-2.47□□□□□ -2.8
CHD1O14646 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 RNA5SP405-201ENST00000363059 114 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 Y_RNA.515-201ENST00000384535 112 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 MIRLET7B-201ENST00000385140 83 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 RNU6-1000P-201ENST00000391066 106 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 RNU6-20P-201ENST00000384106 107 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 SNORA51.5-201ENST00000384126 131 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 AF228730.3-201ENST00000436691 102 ntBASIC-2.48□□□□□ -2.81
CHD1O14646 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-2.48□□□□□ -2.81
CHD1O14646 RNY1P11-201ENST00000363759 113 ntBASIC-2.49□□□□□ -2.81
CHD1O14646 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.49□□□□□ -2.81
CHD1O14646 RNU6-337P-201ENST00000391243 106 ntBASIC-2.49□□□□□ -2.81
CHD1O14646 SNORA18.6-201ENST00000516792 115 ntBASIC-2.49□□□□□ -2.81
CHD1O14646 RNU6-1270P-201ENST00000517128 108 ntBASIC-2.49□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms