Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MIR4802-201ENST00000581881 80 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 AC097639.2-201ENST00000603159 172 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 AC104985.2-201ENST00000620598 500 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 AL391099.1-201ENST00000624635 187 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 SNRPGP8-201ENST00000454064 226 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 U8.20-201ENST00000459445 131 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 MIR4436A-201ENST00000585278 85 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 SNORD58B-201ENST00000607313 66 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 AL008718.3-201ENST00000610217 321 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 U4.5-201ENST00000617137 123 ntBASIC-0.74□□□□□ -2.53
SDCBPO00560 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 SNORD113-8-201ENST00000363497 74 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 RNU6-509P-201ENST00000363519 107 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 MIR1277-201ENST00000408536 78 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 RPS29P8-201ENST00000445109 171 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 TRAJ51-201ENST00000504127 63 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 RNU6-358P-201ENST00000516564 75 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 MIR3920-201ENST00000581751 86 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 RPS29P30-201ENST00000600975 111 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 AL359881.1-201ENST00000602916 267 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 AC084782.3-201ENST00000612282 578 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.75□□□□□ -2.53
SDCBPO00560 RNU6-845P-201ENST00000362578 103 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 RNU4-24P-201ENST00000364565 139 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 RNU6-449P-201ENST00000383914 107 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 RNU6-662P-201ENST00000384253 104 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 MIR599-201ENST00000385069 95 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 MT-TT-201ENST00000387460 66 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 RNA5SP153-201ENST00000516498 76 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 RNA5SP169-201ENST00000517268 117 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 MIR548H5-201ENST00000580314 60 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 MIR4473-201ENST00000583731 91 ntBASIC-0.76□□□□□ -2.53
SDCBPO00560 MIR101-1-201ENST00000362265 75 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 SNORD116-29-201ENST00000384516 83 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 RNU2-55P-201ENST00000411146 174 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 RNU6-559P-201ENST00000516151 98 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 RNU6-720P-201ENST00000516363 108 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 SNORD67.1-201ENST00000516618 108 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 RNU7-137P-201ENST00000516788 62 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 SNORD116.3-201ENST00000517176 78 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 MIR5589-201ENST00000579442 60 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 MTND4LP32-201ENST00000636111 270 ntBASIC-0.77□□□□□ -2.53
SDCBPO00560 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.78□□□□□ -2.53
SDCBPO00560 SNORA40.14-201ENST00000516543 86 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 RNU6-175P-201ENST00000516896 107 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 RNA5SP66-201ENST00000517178 101 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 AC006006.1-201ENST00000603082 144 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 AC084781.2-201ENST00000615568 161 ntBASIC-0.78□□□□□ -2.53
SDCBPO00560 RNU4-84P-201ENST00000364200 139 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 RNU1-141P-201ENST00000364623 158 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 SNORD81.2-201ENST00000365153 76 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 SNORA32-201ENST00000384072 121 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 SNORA3B-201ENST00000391305 131 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 MIR5688-201ENST00000580619 83 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 snoU18.1-201ENST00000629629 71 ntBASIC-0.79□□□□□ -2.54
SDCBPO00560 RNA5SP98-201ENST00000363158 137 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 SNORD116-2-201ENST00000384274 95 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 SNORD116-6-201ENST00000384711 96 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 MIR181B2-201ENST00000385004 89 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 SNORA53-201ENST00000391141 249 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 MIR1912-201ENST00000410389 80 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 RNA5SP451-201ENST00000410588 110 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 SCARNA15-202ENST00000516881 127 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms