Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 Y_RNA.672-201ENST00000516289 104 ntBASIC-3.63□□□□□ -2.99
LINC01549A6NIU2 FGF7P2-201ENST00000332473 296 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 RNU6-888P-201ENST00000363010 101 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.405-201ENST00000383979 100 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.451-201ENST00000384200 100 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.524-201ENST00000384564 100 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.561-201ENST00000384694 100 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 GPR143P-201ENST00000434155 205 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 MTND1P34-201ENST00000438556 671 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 MTND2P30-201ENST00000456663 382 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 RNU6-1170P-201ENST00000515974 106 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 MIR5583-1-201ENST00000580941 59 ntBASIC-3.64□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.293-201ENST00000364908 93 ntBASIC-3.65□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.432-201ENST00000384087 111 ntBASIC-3.65□□□□□ -2.99
LINC01549A6NIU2 SNORD61-201ENST00000384252 73 ntBASIC-3.65□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.613-201ENST00000410726 97 ntBASIC-3.65□□□□□ -2.99
LINC01549A6NIU2 AC009878.1-201ENST00000621819 340 ntBASIC-3.65□□□□□ -2.99
LINC01549A6NIU2 Y_RNA.491-201ENST00000384417 107 ntBASIC-3.66□□□□□ -3
LINC01549A6NIU2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-3.66□□□□□ -3
LINC01549A6NIU2 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 Y_RNA.157-201ENST00000363638 102 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 RNU6-54P-201ENST00000365563 107 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 RNU6-214P-201ENST00000384130 107 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 MIR5696-201ENST00000578474 85 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 MIR4662B-201ENST00000579498 81 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-3.67□□□□□ -3
LINC01549A6NIU2 Y_RNA.76-201ENST00000362931 109 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 Y_RNA.106-201ENST00000363189 100 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 Y_RNA.358-201ENST00000365491 99 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 PCMTD1P1-201ENST00000455560 355 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 Y_RNA.698-201ENST00000516798 118 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 Y_RNA.706-201ENST00000516933 99 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 RNU6-1270P-201ENST00000517128 108 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-3.68□□□□□ -3
LINC01549A6NIU2 U6.100-201ENST00000636230 99 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 MIR5683-201ENST00000636514 76 ntBASIC-3.68□□□□□ -3
LINC01549A6NIU2 Y_RNA.486-201ENST00000384398 107 ntBASIC-3.69□□□□□ -3
LINC01549A6NIU2 RNU6-790P-201ENST00000384479 105 ntBASIC-3.69□□□□□ -3
LINC01549A6NIU2 SNORA36B-201ENST00000410438 131 ntBASIC-3.69□□□□□ -3
LINC01549A6NIU2 AC104850.1-201ENST00000435940 476 ntBASIC-3.69□□□□□ -3
LINC01549A6NIU2 AC060780.3-201ENST00000589464 80 ntBASIC-3.69□□□□□ -3
LINC01549A6NIU2 DLEU2_5.2-201ENST00000610606 84 ntBASIC-3.69□□□□□ -3
LINC01549A6NIU2 RNU6-108P-201ENST00000365558 107 ntBASIC-3.7□□□□□ -3
LINC01549A6NIU2 MIR1-2-201ENST00000384961 85 ntBASIC-3.7□□□□□ -3
LINC01549A6NIU2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-3.7□□□□□ -3
LINC01549A6NIU2 MIR548AM-201ENST00000584298 74 ntBASIC-3.7□□□□□ -3
LINC01549A6NIU2 AC016911.1-201ENST00000613297 452 ntBASIC-3.7□□□□□ -3
LINC01549A6NIU2 TRDV1-202ENST00000621643 102 ntBASIC-3.7□□□□□ -3
LINC01549A6NIU2 Y_RNA.101-201ENST00000363154 102 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 Y_RNA.117-201ENST00000363294 101 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 RNU6-879P-201ENST00000364328 108 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 RNU6-1200P-201ENST00000384162 107 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 Y_RNA.528-201ENST00000384575 108 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 RNY3P9-201ENST00000384727 106 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 RPL35AP4-201ENST00000412007 102 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 AL160004.2-201ENST00000432935 350 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 MTND3P16-201ENST00000452205 344 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 Vault.3-201ENST00000516676 95 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 AL133173.2-201ENST00000614270 90 ntBASIC-3.71□□□□□ -3
LINC01549A6NIU2 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 Y_RNA.348-201ENST00000365403 103 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 Y_RNA.446-201ENST00000384178 104 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 MT-TM-201ENST00000387377 68 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 MIR190B-201ENST00000401119 79 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 SNORD54-201ENST00000459159 67 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 RNU6-1057P-201ENST00000517162 102 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 U6.96-201ENST00000636425 70 ntBASIC-3.72□□□□□ -3
LINC01549A6NIU2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.73□□□□□ -3.01
LINC01549A6NIU2 RNU6-559P-201ENST00000516151 98 ntBASIC-3.73□□□□□ -3.01
LINC01549A6NIU2 HULC.1-201ENST00000612720 240 ntBASIC-3.73□□□□□ -3.01
LINC01549A6NIU2 AP001506.1-201ENST00000615444 211 ntBASIC-3.73□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.91-201ENST00000363042 107 ntBASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 RNU6-318P-201ENST00000384283 103 ntBASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.558-201ENST00000384685 113 ntBASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 UBE2V1P7-201ENST00000446395 340 ntBASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 MIR5692C1-201ENST00000585309 91 ntBASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 AC005014.3-201ENST00000605985 190 ntBASIC-3.74□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.171-201ENST00000363760 102 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 SNORD113-7-201ENST00000363762 77 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.302-201ENST00000364997 102 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 RNU4-17P-201ENST00000365598 141 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 RNU6-1321P-201ENST00000390905 107 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 RNU6-903P-201ENST00000391270 109 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 SNORD42B-201ENST00000458893 67 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 RNU6-189P-201ENST00000516120 101 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 AP002795.1-201ENST00000534879 84 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 AC011476.5-201ENST00000615594 130 ntBASIC-3.75□□□□□ -3.01
LINC01549A6NIU2 SNORA32-201ENST00000384072 121 ntBASIC-3.76□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.470-201ENST00000384307 117 ntBASIC-3.76□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.515-201ENST00000384535 112 ntBASIC-3.76□□□□□ -3.01
LINC01549A6NIU2 RNU7-48P-201ENST00000458875 63 ntBASIC-3.76□□□□□ -3.01
LINC01549A6NIU2 AL158211.2-201ENST00000607282 395 ntBASIC-3.76□□□□□ -3.01
LINC01549A6NIU2 AC103591.3-201ENST00000608684 209 ntBASIC-3.76□□□□□ -3.01
LINC01549A6NIU2 AL590004.1-201ENST00000405321 300 ntBASIC-3.77□□□□□ -3.01
LINC01549A6NIU2 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.77□□□□□ -3.01
LINC01549A6NIU2 RNU6-408P-201ENST00000515910 100 ntBASIC-3.77□□□□□ -3.01
LINC01549A6NIU2 RNU6-155P-201ENST00000516347 100 ntBASIC-3.77□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms