Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 RNY1P13-201ENST00000365030 105 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 RNU6-326P-201ENST00000365480 107 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 MIR501-201ENST00000390204 84 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 SNORD4A-201ENST00000459174 72 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 SNORA27.4-201ENST00000516650 95 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 RNU6-531P-201ENST00000516694 104 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 MIR5706-201ENST00000579841 80 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 MIR5197-201ENST00000583721 112 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 MIR376A2-201ENST00000636782 80 ntBASIC-0.46□□□□□ -2.48
TRBV11-1A0A0K0K1C0 RNU4-58P-201ENST00000363192 141 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 SNORD115-24-201ENST00000363528 82 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 MIR626-201ENST00000385032 94 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 SNRPGP8-201ENST00000454064 226 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 RNU2-60P-201ENST00000517290 128 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 AC021613.1-201ENST00000623880 111 ntBASIC-0.47□□□□□ -2.48
TRBV11-1A0A0K0K1C0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 SNORA63.5-201ENST00000363548 123 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-923P-201ENST00000364753 107 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNY3P5-201ENST00000384127 102 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MT-TT-201ENST00000387460 66 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MIR6841-201ENST00000637129 72 ntBASIC-0.48□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-726P-201ENST00000364680 107 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU4-70P-201ENST00000384579 139 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MIR548AD-201ENST00000584780 82 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AC097639.2-201ENST00000603159 172 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 SNORA70.25-201ENST00000612741 95 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AL442067.1-201ENST00000613261 223 ntBASIC-0.49□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.5□□□□□ -2.49
TRBV11-1A0A0K0K1C0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.5□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-893P-201ENST00000458841 100 ntBASIC-0.5□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MIR5589-201ENST00000579442 60 ntBASIC-0.5□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MIR4645-201ENST00000583158 77 ntBASIC-0.5□□□□□ -2.49
TRBV11-1A0A0K0K1C0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNA5SP133-201ENST00000363368 119 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 SNORA22B-201ENST00000383876 138 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-211P-201ENST00000384047 107 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AL606845.1-201ENST00000404881 255 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MIR1912-201ENST00000410389 80 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 SNORA40.15-201ENST00000516884 107 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MIR4636-201ENST00000582271 80 ntBASIC-0.51□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-161P-201ENST00000363051 106 ntBASIC-0.52□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.52□□□□□ -2.49
TRBV11-1A0A0K0K1C0 FGF7P4-201ENST00000509595 295 ntBASIC-0.52□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU7-79P-201ENST00000516082 62 ntBASIC-0.52□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-180P-201ENST00000516697 61 ntBASIC-0.52□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AL162376.1-201ENST00000624117 175 ntBASIC-0.52□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-450P-201ENST00000364654 107 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 RNU6-46P-201ENST00000383860 107 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AP001180.6-201ENST00000584918 159 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 AL670379.3-201ENST00000605040 251 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 U6.109-201ENST00000636749 87 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 MTND5P32-201ENST00000560711 1802 ntBASIC-0.53□□□□□ -2.49
TRBV11-1A0A0K0K1C0 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNY3P1-201ENST00000365085 102 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 SNORA79-201ENST00000408376 140 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU6-101P-201ENST00000410323 104 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU6-121P-201ENST00000410525 99 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU7-104P-201ENST00000459398 79 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 AC138749.4-201ENST00000563970 127 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 MIR4677-201ENST00000584153 80 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 MIR6514-201ENST00000622549 70 ntBASIC-0.54□□□□□ -2.5
TRBV11-1A0A0K0K1C0 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU4-16P-201ENST00000364737 141 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU6-702P-201ENST00000364982 107 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 RNU6-823P-201ENST00000391042 103 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 MIR1252-201ENST00000408861 65 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 AC108059.2-201ENST00000434626 151 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 MIR378D2-201ENST00000580636 98 ntBASIC-0.55□□□□□ -2.5
TRBV11-1A0A0K0K1C0 AC139792.2-201ENST00000624218 587 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms