Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 Y_RNA.711-201ENST00000516993 102 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 MIR4680-201ENST00000580906 66 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 AC097639.2-201ENST00000603159 172 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 AC134503.1-201ENST00000633048 54 ntBASIC0□□□□□ -2.41
TRAV39A0A0B4J263 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-716P-201ENST00000365621 103 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-535P-201ENST00000384722 107 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 MIR548P-201ENST00000408336 84 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 MTND5P34-201ENST00000568888 325 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 MIR6755-201ENST00000619993 66 ntBASIC-0.01□□□□□ -2.41
TRAV39A0A0B4J263 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORA22.1-201ENST00000362701 134 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 RNA5SP457-201ENST00000363657 124 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORA18-201ENST00000384416 132 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORA79-201ENST00000408376 140 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORA25.16-201ENST00000516741 121 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 MIR3171-201ENST00000584270 74 ntBASIC-0.02□□□□□ -2.41
TRAV39A0A0B4J263 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 RNU4-16P-201ENST00000364737 141 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-291P-201ENST00000384720 107 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 MTATP6P23-201ENST00000440153 476 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 AC021613.1-201ENST00000623880 111 ntBASIC-0.03□□□□□ -2.41
TRAV39A0A0B4J263 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-949P-201ENST00000384040 107 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 MIR643-201ENST00000385267 97 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 MIR760-201ENST00000390220 80 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 AC096949.1-201ENST00000412047 152 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-765P-201ENST00000516916 99 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 DEFB131E-201ENST00000532329 154 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 AL442663.2-201ENST00000554385 511 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 AL365265.1-201ENST00000621045 234 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 AC091304.10-201ENST00000641554 121 ntBASIC-0.04□□□□□ -2.42
TRAV39A0A0B4J263 SNORA42.1-201ENST00000363515 137 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-728P-201ENST00000365375 104 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 SNORD2.1-201ENST00000458762 69 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 TRBVB-201ENST00000477100 408 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 RNA5SP330-201ENST00000517096 96 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 RNA5SP47-201ENST00000517230 109 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 AL442067.1-201ENST00000613261 223 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 AC244669.1-204ENST00000621564 178 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 MIR6841-201ENST00000637129 72 ntBASIC-0.05□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 RNY1P13-201ENST00000365030 105 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 SNORD28-201ENST00000384706 75 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-381P-201ENST00000391259 108 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 AL358176.2-201ENST00000425769 204 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-135P-201ENST00000516769 101 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 MIR4752-201ENST00000579672 72 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 U2.14-201ENST00000615943 113 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 MIR6828-201ENST00000636181 60 ntBASIC-0.06□□□□□ -2.42
TRAV39A0A0B4J263 MTND5P32-201ENST00000560711 1802 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 MTND4LP11-201ENST00000422184 280 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 MIR4639-201ENST00000584938 69 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 AL365205.2-201ENST00000594586 68 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.07□□□□□ -2.42
TRAV39A0A0B4J263 RNA5SP325-201ENST00000363756 130 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 RNU4-17P-201ENST00000365598 141 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-713P-201ENST00000384761 107 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 MIR7-2-201ENST00000384970 110 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.08□□□□□ -2.42
TRAV39A0A0B4J263 AL121914.1-201ENST00000450188 156 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms