Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PCDHA9Q9Y5H5 RNY4P6-201ENST00000363667 96 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 Y_RNA.171-201ENST00000363760 102 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-1104P-201ENST00000384723 104 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 snoU13.25-201ENST00000458945 104 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-1258P-201ENST00000516911 111 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 MTND5P34-201ENST00000568888 325 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.76□□□□□ -2.13
PCDHA9Q9Y5H5 SNORD114-1-201ENST00000362705 72 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 MIR1302-7-201ENST00000408841 72 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 AC245047.7-201ENST00000440265 293 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 MIR3163-201ENST00000581592 73 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 AP000942.3-201ENST00000603702 160 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 MIR8065-201ENST00000620577 100 ntBASIC1.75□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-215P-201ENST00000365169 102 ntBASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-396P-201ENST00000365369 105 ntBASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 AC090844.1-201ENST00000422019 156 ntBASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 RPS23P4-201ENST00000487908 423 ntBASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PCDHA9Q9Y5H5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-1325P-201ENST00000364905 105 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 SNORD116-21-201ENST00000384507 92 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 SNORD20-201ENST00000384550 80 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 AC022523.2-201ENST00000561045 150 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 MIR4679-2-201ENST00000578358 77 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 MIR3945-201ENST00000581853 98 ntBASIC1.73□□□□□ -2.13
PCDHA9Q9Y5H5 SNORA25.3-201ENST00000363205 127 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-880P-201ENST00000384526 107 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 MIR548A1-201ENST00000385041 97 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 MT-TI-201ENST00000387365 69 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 RNU4-69P-201ENST00000410677 143 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 RNA5SP33-201ENST00000516687 98 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 RN7SKP88-201ENST00000516847 250 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 AC007012.1-201ENST00000567192 175 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 7SK.8-201ENST00000612110 250 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 7SK.11-201ENST00000615477 250 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 7SK.13-201ENST00000622040 250 ntBASIC1.72□□□□□ -2.13
PCDHA9Q9Y5H5 RNU6-429P-201ENST00000384582 108 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 MT-TN-201ENST00000387400 73 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 RN7SL429P-201ENST00000479090 223 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 RN7SL489P-201ENST00000486185 223 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 RN7SL327P-201ENST00000488659 223 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 MIR2115-201ENST00000516657 100 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 RNU6-919P-201ENST00000516731 104 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 RN7SL853P-201ENST00000617250 223 ntBASIC1.71□□□□□ -2.14
PCDHA9Q9Y5H5 MIR103A2-201ENST00000362154 78 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 Y_RNA.470-201ENST00000384307 117 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 MIR1185-1-201ENST00000408598 86 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 AC244023.1-201ENST00000426884 112 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 AC242498.1-201ENST00000604134 111 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 MIR6129-201ENST00000616087 109 ntBASIC1.7□□□□□ -2.14
PCDHA9Q9Y5H5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 RNU6-589P-201ENST00000516485 107 ntBASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 MIR4285-201ENST00000581001 85 ntBASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHA9Q9Y5H5 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 MIR548D2-201ENST00000384955 97 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 RNU6-412P-201ENST00000516434 106 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 RNU7-6P-201ENST00000516845 62 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 Y_RNA.709-201ENST00000516952 92 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 MIR3618-201ENST00000580330 88 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 MIR4264-201ENST00000583520 66 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 AP000753.3-201ENST00000604083 169 ntBASIC1.68□□□□□ -2.14
PCDHA9Q9Y5H5 Y_RNA.35-201ENST00000362601 101 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 Y_RNA.281-201ENST00000364774 94 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 RNU6-613P-201ENST00000410412 108 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 MIR548AE2-201ENST00000583456 67 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 MIR6516-201ENST00000630554 81 ntBASIC1.67□□□□□ -2.14
PCDHA9Q9Y5H5 SNORD12C-201ENST00000386307 89 ntBASIC1.66□□□□□ -2.14
PCDHA9Q9Y5H5 U8.13-201ENST00000390842 128 ntBASIC1.66□□□□□ -2.14
PCDHA9Q9Y5H5 SNORD77B-201ENST00000391112 67 ntBASIC1.66□□□□□ -2.14
PCDHA9Q9Y5H5 AC048334.1-201ENST00000477975 159 ntBASIC1.66□□□□□ -2.14
PCDHA9Q9Y5H5 RNU7-35P-201ENST00000517174 62 ntBASIC1.66□□□□□ -2.14
PCDHA9Q9Y5H5 AC087741.2-201ENST00000619415 172 ntBASIC1.66□□□□□ -2.14
PCDHA9Q9Y5H5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
PCDHA9Q9Y5H5 MIR377-201ENST00000362145 69 ntBASIC1.65□□□□□ -2.15
PCDHA9Q9Y5H5 SNORD115-19-201ENST00000363098 82 ntBASIC1.65□□□□□ -2.15
PCDHA9Q9Y5H5 SNORD115-18-201ENST00000363293 82 ntBASIC1.65□□□□□ -2.15
PCDHA9Q9Y5H5 SNORD115-17-201ENST00000364612 82 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms