Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR520C-201ENST00000385005 87 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 SNORD28B-201ENST00000390993 75 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 RNU7-45P-201ENST00000459460 63 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 AC090821.2-201ENST00000523552 176 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
PCDHB1Q9Y5F3 SNORA22-201ENST00000383907 134 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 SNORD116-21-201ENST00000384507 92 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 RPL30P7-201ENST00000479312 323 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 PDCD5P2-201ENST00000507570 312 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 RNY4P20-201ENST00000516678 93 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 RNU7-70P-201ENST00000516941 66 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 AC022523.2-201ENST00000561045 150 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 MIR4764-201ENST00000580680 88 ntBASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
PCDHB1Q9Y5F3 RNY1P10-201ENST00000363268 113 ntBASIC1.71□□□□□ -2.14
PCDHB1Q9Y5F3 RNU1-133P-201ENST00000364867 167 ntBASIC1.71□□□□□ -2.14
PCDHB1Q9Y5F3 MIR499A-201ENST00000384903 122 ntBASIC1.71□□□□□ -2.14
PCDHB1Q9Y5F3 AC063976.4-201ENST00000421971 163 ntBASIC1.71□□□□□ -2.14
PCDHB1Q9Y5F3 RNU7-96P-201ENST00000459535 64 ntBASIC1.71□□□□□ -2.14
PCDHB1Q9Y5F3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.71□□□□□ -2.14
PCDHB1Q9Y5F3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 RNY1P6-201ENST00000384193 109 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 SNORD41-201ENST00000386967 70 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 RPS29P24-201ENST00000486345 171 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 RNA5SP445-201ENST00000515889 115 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 RNU2-13P-201ENST00000515909 113 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 RNU2-35P-201ENST00000516446 142 ntBASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHB1Q9Y5F3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 AL035398.1-201ENST00000430869 322 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RPL39P39-201ENST00000455840 151 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RPS29P29-201ENST00000456396 171 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RNU7-67P-201ENST00000459003 62 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-998P-201ENST00000515894 101 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RNU7-123P-201ENST00000515911 60 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-113P-201ENST00000516653 101 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 RNU7-53P-201ENST00000516705 60 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 AC019176.1-201ENST00000518519 225 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 AC021443.1-201ENST00000604478 211 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 AC243994.1-201ENST00000618627 109 ntBASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.69□□□□□ -2.14
PCDHB1Q9Y5F3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 SNORA25.9-201ENST00000365087 128 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-1190P-201ENST00000410811 104 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 MIR4255-201ENST00000579351 72 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 MIR4791-201ENST00000607666 84 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 AL035470.1-201ENST00000622571 220 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 AC008133.2-201ENST00000624540 351 ntBASIC1.68□□□□□ -2.14
PCDHB1Q9Y5F3 MIR302B-201ENST00000362188 73 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 SNORA24-201ENST00000384096 131 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 SNORA51.10-201ENST00000384418 136 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 RNU2-11P-201ENST00000459191 187 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 RNU7-164P-201ENST00000459221 62 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 RNU7-95P-201ENST00000459222 64 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 SNORD111.1-201ENST00000516421 86 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-902P-201ENST00000517212 91 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 MIR3664-201ENST00000579074 99 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PCDHB1Q9Y5F3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-958P-201ENST00000516995 106 ntBASIC1.66□□□□□ -2.14
PCDHB1Q9Y5F3 MIR4305-201ENST00000583252 102 ntBASIC1.66□□□□□ -2.14
PCDHB1Q9Y5F3 uc_338.28-201ENST00000612082 187 ntBASIC1.66□□□□□ -2.14
PCDHB1Q9Y5F3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.66□□□□□ -2.14
PCDHB1Q9Y5F3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PCDHB1Q9Y5F3 RNU6-880P-201ENST00000384526 107 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-913P-201ENST00000390913 95 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 snoU13.16-201ENST00000459350 104 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 COX6CP6-201ENST00000490840 228 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 AC007012.1-201ENST00000567192 175 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
PCDHB1Q9Y5F3 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 MIR450A1-201ENST00000362262 91 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 RNA5SP48-201ENST00000363969 126 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-755P-201ENST00000364400 103 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-147P-201ENST00000383983 107 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 RNA5SP136-201ENST00000410906 107 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 AL512326.2-201ENST00000426359 151 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 RNU7-73P-201ENST00000458743 63 ntBASIC1.64□□□□□ -2.15
PCDHB1Q9Y5F3 RNU6-947P-201ENST00000516264 106 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms