Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 RNU6-1018P-201ENST00000516577 106 ntBASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORA28-201ENST00000606769 126 ntBASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR4791-201ENST00000607666 84 ntBASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 AC022202.1-201ENST00000613515 211 ntBASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR6841-201ENST00000637129 72 ntBASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-1313P-201ENST00000362622 102 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 Y_RNA.96-201ENST00000363092 109 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 U8.15-201ENST00000390947 134 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORA11.4-201ENST00000408823 129 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 Y_RNA.611-201ENST00000410682 108 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU7-67P-201ENST00000459003 62 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 RNA5SP168-201ENST00000516642 112 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU7-193P-201ENST00000516723 65 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 AP006437.1-201ENST00000641440 3685 ntBASIC2.07□□□□□ -2.08
TSC22D4Q9Y3Q8 Y_RNA.4-201ENST00000362333 112 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORA1.1-201ENST00000364671 133 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 Y_RNA.370-201ENST00000365589 108 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORD58A-201ENST00000383875 65 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 UBL5P1-201ENST00000507979 193 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR3152-201ENST00000579801 74 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 AC096720.1-201ENST00000604441 183 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
TSC22D4Q9Y3Q8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-833P-201ENST00000363486 107 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-1296P-201ENST00000383879 107 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 Y_RNA.426-201ENST00000384068 113 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-913P-201ENST00000390913 95 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORD28B-201ENST00000390993 75 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 AC090844.1-201ENST00000422019 156 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 AC093850.1-201ENST00000454121 251 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 AC069114.2-201ENST00000604699 304 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-86P-201ENST00000606534 107 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 AC103810.7-201ENST00000607821 91 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR6717-201ENST00000622747 73 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 AC006160.2-201ENST00000637708 154 ntBASIC2.05□□□□□ -2.08
TSC22D4Q9Y3Q8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORD116-10-201ENST00000363791 102 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-652P-201ENST00000365488 107 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORA70B-201ENST00000384210 135 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-1307P-201ENST00000391012 103 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 BX510359.4-201ENST00000423750 193 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 HMGN1P33-201ENST00000432945 451 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-237P-201ENST00000515985 71 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU7-53P-201ENST00000516705 60 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 SEPT14P17-201ENST00000617978 177 ntBASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
TSC22D4Q9Y3Q8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU1-58P-201ENST00000362413 163 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 SNORA1.2-201ENST00000365189 134 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-24P-201ENST00000384440 107 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 AL034345.1-201ENST00000407768 123 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 RPS29P29-201ENST00000456396 171 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 RNU6-1006P-201ENST00000516998 103 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 AC005786.1-201ENST00000588553 154 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 MIR548BB-201ENST00000626714 66 ntBASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TSC22D4Q9Y3Q8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 AP000648.3-201ENST00000623539 4507 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 RNU6-1163P-201ENST00000364516 107 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 SNORA70.7-201ENST00000384159 133 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 RNU6-342P-201ENST00000384521 104 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 MIR597-201ENST00000384968 97 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 DNAJC19P9-201ENST00000555084 351 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 MIR548AR-201ENST00000582191 57 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 AC012493.3-201ENST00000604494 112 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 AL020996.3-201ENST00000606617 222 ntBASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
TSC22D4Q9Y3Q8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TSC22D4Q9Y3Q8 Y_RNA.140-201ENST00000363474 103 ntBASIC2.01□□□□□ -2.09
TSC22D4Q9Y3Q8 RNU6-509P-201ENST00000363519 107 ntBASIC2.01□□□□□ -2.09
TSC22D4Q9Y3Q8 Y_RNA.430-201ENST00000384081 110 ntBASIC2.01□□□□□ -2.09
TSC22D4Q9Y3Q8 SNORA24-201ENST00000384096 131 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms