Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 RNU6-363P-201ENST00000362895 105 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 RNA5SP48-201ENST00000363969 126 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 RNU6-733P-201ENST00000410759 104 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 RNU6-970P-201ENST00000516312 107 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 MIR4446-201ENST00000578505 67 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 MIR3935-201ENST00000583472 104 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 AC006254.2-201ENST00000603259 279 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 MIR1255B1-201ENST00000636325 63 ntBASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CXXC1Q9P0U4 SNORA32-201ENST00000384072 121 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 MIR590-201ENST00000385008 97 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 MIR221-201ENST00000385135 110 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 RNY4P30-201ENST00000410216 95 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 AC108667.1-201ENST00000428618 249 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 AC245047.7-201ENST00000440265 293 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 RNU6-922P-201ENST00000516753 99 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 DEFB131E-201ENST00000532329 154 ntBASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CXXC1Q9P0U4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 Y_RNA.348-201ENST00000365403 103 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 RNU7-41P-201ENST00000515917 61 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 RNU6-904P-201ENST00000516206 101 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 MIR4299-201ENST00000577899 72 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 MIR8070-201ENST00000616510 88 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 FO624990.1-201ENST00000636373 85 ntBASIC2.46□□□□□ -2.02
CXXC1Q9P0U4 RNU6-616P-201ENST00000384353 107 ntBASIC2.45□□□□□ -2.02
CXXC1Q9P0U4 SNORA19.1-201ENST00000410656 129 ntBASIC2.45□□□□□ -2.02
CXXC1Q9P0U4 RNU6-321P-201ENST00000410912 106 ntBASIC2.45□□□□□ -2.02
CXXC1Q9P0U4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
CXXC1Q9P0U4 MIR548AO-201ENST00000579992 96 ntBASIC2.45□□□□□ -2.02
CXXC1Q9P0U4 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
CXXC1Q9P0U4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 RNU6-905P-201ENST00000384434 107 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 SNORD38B-201ENST00000384690 67 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 RNU6-602P-201ENST00000411155 105 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 AC015688.6-201ENST00000577737 104 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 MIR4694-201ENST00000578534 80 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 MIR8065-201ENST00000620577 100 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 SNORD38B-202ENST00000625943 69 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 MIR2052-201ENST00000636055 55 ntBASIC2.44□□□□□ -2.02
CXXC1Q9P0U4 RNY3P2-201ENST00000362918 102 ntBASIC2.43□□□□□ -2.02
CXXC1Q9P0U4 SNORA25.9-201ENST00000365087 128 ntBASIC2.43□□□□□ -2.02
CXXC1Q9P0U4 MIR17-201ENST00000385012 84 ntBASIC2.43□□□□□ -2.02
CXXC1Q9P0U4 SNORD41-201ENST00000386967 70 ntBASIC2.43□□□□□ -2.02
CXXC1Q9P0U4 SNORA77B-201ENST00000578179 125 ntBASIC2.43□□□□□ -2.02
CXXC1Q9P0U4 MIR5582-201ENST00000579697 68 ntBASIC2.43□□□□□ -2.02
CXXC1Q9P0U4 RNY1P10-201ENST00000363268 113 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 Y_RNA.360-201ENST00000365512 102 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 SNORA18-201ENST00000384416 132 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 SNORA7.5-201ENST00000410672 110 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 snoU13.18-201ENST00000459483 104 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 GHRLOS.1-201ENST00000610995 70 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 MIR6845-201ENST00000613182 61 ntBASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.42□□□□□ -2.02
CXXC1Q9P0U4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 RNU6-640P-201ENST00000363693 105 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 HSPE1P24-201ENST00000450782 238 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 AC009474.2-201ENST00000451383 136 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 RNU6-109P-201ENST00000516364 107 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 RNU6-184P-201ENST00000516514 107 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 SNORA44.1-201ENST00000517031 108 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 RNU6-158P-201ENST00000517104 100 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 MIR8063-201ENST00000621930 81 ntBASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CXXC1Q9P0U4 Y_RNA.107-201ENST00000363190 121 ntBASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 RNU6-1099P-201ENST00000363533 107 ntBASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 RNU6-342P-201ENST00000384521 104 ntBASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 RPL39P39-201ENST00000455840 151 ntBASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 SCARNA23-201ENST00000516060 130 ntBASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CXXC1Q9P0U4 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 MIR378A-201ENST00000362177 66 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 Y_RNA.369-201ENST00000365568 117 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 MIR7-2-201ENST00000384970 110 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 snoU13.9-201ENST00000458927 103 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 MIR1270-201ENST00000459320 83 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 RNU6-521P-201ENST00000516663 105 ntBASIC2.39□□□□□ -2.03
CXXC1Q9P0U4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 MIR605-201ENST00000385078 83 ntBASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 RNU6-250P-201ENST00000516958 103 ntBASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 RNU7-35P-201ENST00000517174 62 ntBASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 MIR6766-201ENST00000622641 72 ntBASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CXXC1Q9P0U4 RNU6-832P-201ENST00000363319 107 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms