Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SNORA22-201ENST00000383907 134 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 Y_RNA.531-201ENST00000384589 121 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 snoU13.23-201ENST00000458863 104 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 MIR3192-201ENST00000584920 77 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 AL357312.1-201ENST00000603879 298 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 MIR8055-201ENST00000610739 97 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 MIR6841-201ENST00000637129 72 ntBASIC1.77□□□□□ -2.13
KCMF1Q9P0J7 MIR302D-201ENST00000362275 68 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 RNY4P6-201ENST00000363667 96 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 SNORD1A-201ENST00000364968 72 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 RPS3AP1-201ENST00000413190 320 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 AC063976.4-201ENST00000421971 163 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 AC108210.2-201ENST00000503681 201 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 AC079140.2-201ENST00000506193 142 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 MIR3163-201ENST00000581592 73 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 AL096861.1-201ENST00000610899 123 ntBASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KCMF1Q9P0J7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 AC009474.2-201ENST00000451383 136 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 RNU7-6P-201ENST00000516845 62 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 RNU6-250P-201ENST00000516958 103 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 MIR3937-201ENST00000580135 106 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
KCMF1Q9P0J7 SNORA63.5-201ENST00000363548 123 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 RNA5SP48-201ENST00000363969 126 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 RNA5SP99-201ENST00000364020 114 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 Y_RNA.470-201ENST00000384307 117 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 SNORD12C-201ENST00000386307 89 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 AC113410.1-201ENST00000505029 247 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 RNA5SP33-201ENST00000516687 98 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 RNU6-548P-201ENST00000517083 115 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 CYP3A52P-201ENST00000563326 91 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 AL035470.1-201ENST00000622571 220 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 Z97988.1-201ENST00000637697 135 ntBASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KCMF1Q9P0J7 SNORA25.3-201ENST00000363205 127 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 Y_RNA.362-201ENST00000365518 110 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 AC090844.1-201ENST00000422019 156 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 RPL39P39-201ENST00000455840 151 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 RPS23P4-201ENST00000487908 423 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 PDCD5P2-201ENST00000507570 312 ntBASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KCMF1Q9P0J7 SNORD33-201ENST00000362761 85 ntBASIC1.72□□□□□ -2.13
KCMF1Q9P0J7 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
KCMF1Q9P0J7 MIR548D2-201ENST00000384955 97 ntBASIC1.72□□□□□ -2.13
KCMF1Q9P0J7 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
KCMF1Q9P0J7 RNU6-412P-201ENST00000516434 106 ntBASIC1.72□□□□□ -2.13
KCMF1Q9P0J7 Y_RNA.281-201ENST00000364774 94 ntBASIC1.71□□□□□ -2.14
KCMF1Q9P0J7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.71□□□□□ -2.14
KCMF1Q9P0J7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
KCMF1Q9P0J7 RNU6-602P-201ENST00000411155 105 ntBASIC1.71□□□□□ -2.14
KCMF1Q9P0J7 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
KCMF1Q9P0J7 MIR548AE2-201ENST00000583456 67 ntBASIC1.71□□□□□ -2.14
KCMF1Q9P0J7 AL589743.1-201ENST00000551932 2712 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 SNORD115-2-201ENST00000362842 82 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 RNU6-1107P-201ENST00000364817 104 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 SNORD115-20-201ENST00000365099 82 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 SNORA32-201ENST00000384072 121 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 RNU4-69P-201ENST00000410677 143 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 AC245047.7-201ENST00000440265 293 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 AC027119.1-201ENST00000440877 241 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 MIR4679-2-201ENST00000578358 77 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 MIR8065-201ENST00000620577 100 ntBASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
KCMF1Q9P0J7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 snoU13.25-201ENST00000458945 104 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 RNA5SP445-201ENST00000515889 115 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 AC087741.2-201ENST00000619415 172 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
KCMF1Q9P0J7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 RNU6-153P-201ENST00000364422 104 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 RNU6-482P-201ENST00000391068 107 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 MIR3664-201ENST00000579074 99 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 uc_338.28-201ENST00000612082 187 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 AL353997.5-201ENST00000618886 171 ntBASIC1.68□□□□□ -2.14
KCMF1Q9P0J7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KCMF1Q9P0J7 RNU6-755P-201ENST00000364400 103 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms