Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNU6-994P-201ENST00000410507 111 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 RNA5SP236-201ENST00000516169 116 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 RNU2-60P-201ENST00000517290 128 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.34□□□□□ -2.19
DDX56Q9NY93 Z97988.1-201ENST00000637697 135 ntBASIC1.34□□□□□ -2.19
DDX56Q9NY93 AL391516.1-201ENST00000554380 2449 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 Y_RNA.168-201ENST00000363740 102 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 Y_RNA.400-201ENST00000383963 111 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 SNORA26.6-201ENST00000391256 115 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 MIR513C-201ENST00000401352 84 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 AC244023.1-201ENST00000426884 112 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 RNU7-197P-201ENST00000458836 62 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 RNA5SP458-201ENST00000516188 119 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 RNU6-1212P-201ENST00000517023 104 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 AC242498.1-201ENST00000604134 111 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 MIR6717-201ENST00000622747 73 ntBASIC1.33□□□□□ -2.2
DDX56Q9NY93 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
DDX56Q9NY93 RNU6-508P-201ENST00000363231 103 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 Y_RNA.354-201ENST00000365448 111 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 SNORD124-201ENST00000459577 104 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 SNORA25.12-201ENST00000516202 82 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 Y_RNA.686-201ENST00000516548 134 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 MIR548X2-201ENST00000579776 100 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 AL136317.1-201ENST00000612653 226 ntBASIC1.32□□□□□ -2.2
DDX56Q9NY93 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.31□□□□□ -2.2
DDX56Q9NY93 Y_RNA.215-201ENST00000364204 112 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 SNORD18B-201ENST00000365659 72 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-1319P-201ENST00000390855 104 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-747P-201ENST00000390928 104 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-241P-201ENST00000391148 104 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-460P-201ENST00000391158 108 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-602P-201ENST00000411155 105 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU6-177P-201ENST00000411257 104 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 RNU7-200P-201ENST00000516105 62 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.31□□□□□ -2.2
DDX56Q9NY93 MIR3152-201ENST00000579801 74 ntBASIC1.31□□□□□ -2.2
DDX56Q9NY93 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
DDX56Q9NY93 RNU6-309P-201ENST00000364573 106 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 RNU4-16P-201ENST00000364737 141 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 RPS3AP1-201ENST00000413190 320 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 MTATP6P21-201ENST00000440681 189 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 PDCD5P2-201ENST00000507570 312 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 AC021613.1-201ENST00000623880 111 ntBASIC1.3□□□□□ -2.2
DDX56Q9NY93 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
DDX56Q9NY93 RNY1P6-201ENST00000384193 109 ntBASIC1.29□□□□□ -2.2
DDX56Q9NY93 RNU6-346P-201ENST00000516288 111 ntBASIC1.29□□□□□ -2.2
DDX56Q9NY93 RNU6-349P-201ENST00000362402 107 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 Y_RNA.120-201ENST00000363304 110 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 SNORA20-201ENST00000384662 132 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 SNORA17.3-201ENST00000391159 129 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 RNA5SP272-201ENST00000516095 111 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 Y_RNA.690-201ENST00000516603 95 ntBASIC1.28□□□□□ -2.2
DDX56Q9NY93 Y_RNA.488-201ENST00000384403 102 ntBASIC1.27□□□□□ -2.21
DDX56Q9NY93 MIR569-201ENST00000385228 96 ntBASIC1.27□□□□□ -2.21
DDX56Q9NY93 SNORD12C-201ENST00000386307 89 ntBASIC1.27□□□□□ -2.21
DDX56Q9NY93 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.27□□□□□ -2.21
DDX56Q9NY93 AC108667.1-201ENST00000428618 249 ntBASIC1.27□□□□□ -2.21
DDX56Q9NY93 U7.7-201ENST00000459276 60 ntBASIC1.27□□□□□ -2.21
DDX56Q9NY93 MIR378A-201ENST00000362177 66 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 RNU6-580P-201ENST00000365159 107 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 Y_RNA.506-201ENST00000384494 102 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 AL603914.1-201ENST00000401964 204 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 RNU4-62P-201ENST00000410125 130 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 Y_RNA.651-201ENST00000459380 103 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 RNU5E-3P-201ENST00000515913 68 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 AC025627.3-201ENST00000582078 182 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.26□□□□□ -2.21
DDX56Q9NY93 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
DDX56Q9NY93 RNU6-915P-201ENST00000364943 103 ntBASIC1.25□□□□□ -2.21
DDX56Q9NY93 Y_RNA.430-201ENST00000384081 110 ntBASIC1.25□□□□□ -2.21
DDX56Q9NY93 POLR2J4-204ENST00000418424 324 ntBASIC1.25□□□□□ -2.21
DDX56Q9NY93 RPS29P28-201ENST00000446439 141 ntBASIC1.25□□□□□ -2.21
DDX56Q9NY93 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.25□□□□□ -2.21
DDX56Q9NY93 RNU6-94P-201ENST00000607728 107 ntBASIC1.25□□□□□ -2.21
DDX56Q9NY93 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.25□□□□□ -2.21
DDX56Q9NY93 SNORA22.1-201ENST00000362701 134 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU6-690P-201ENST00000365242 106 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU6-1062P-201ENST00000383908 107 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 Y_RNA.420-201ENST00000384043 110 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU6-893P-201ENST00000458841 100 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU7-62P-201ENST00000458856 62 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU7-95P-201ENST00000459222 64 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU6-240P-201ENST00000516098 97 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU6-1110P-201ENST00000516462 101 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 RNU6-426P-201ENST00000516464 97 ntBASIC1.24□□□□□ -2.21
DDX56Q9NY93 MIR1-1-201ENST00000362147 71 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 MIR588-201ENST00000384900 83 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 AL603825.1-201ENST00000438481 80 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 265.5 ms