Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.15□□□□□ -2.06
SMPD4Q9NXE4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SMPD4Q9NXE4 RNU6-509P-201ENST00000363519 107 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 SNORA3A-201ENST00000364113 130 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 SNORA1.1-201ENST00000364671 133 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 SNORA32-201ENST00000384072 121 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 AL591806.2-201ENST00000433122 173 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 RNU7-34P-201ENST00000459394 64 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 MIR4524B-201ENST00000581569 115 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 AC103810.7-201ENST00000607821 91 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 AC027279.3-201ENST00000625055 122 ntBASIC2.15□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.94-201ENST00000363068 106 ntBASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 RNU6-1163P-201ENST00000364516 107 ntBASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 SNORD77B-201ENST00000391112 67 ntBASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 MIR889-201ENST00000401280 79 ntBASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMPD4Q9NXE4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 SNORD115-27-201ENST00000364430 82 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.430-201ENST00000384081 110 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 MIR516B2-201ENST00000385190 85 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 RNU6-913P-201ENST00000390913 95 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 RNU6-958P-201ENST00000516995 106 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 MIR4439-201ENST00000583746 80 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 RNU6-86P-201ENST00000606534 107 ntBASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.13□□□□□ -2.07
SMPD4Q9NXE4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 RNU6-633P-201ENST00000362612 103 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.316-201ENST00000365118 111 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 RNU1-148P-201ENST00000384472 162 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 AC096720.1-201ENST00000604441 183 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 MIR4791-201ENST00000607666 84 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 MIR6717-201ENST00000622747 73 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
SMPD4Q9NXE4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 RNU6-23P-201ENST00000363283 107 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 RNU6-424P-201ENST00000384367 105 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 SNORD28B-201ENST00000390993 75 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.609-201ENST00000410669 89 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 RNA5SP168-201ENST00000516642 112 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 SNRPGP19-201ENST00000603826 189 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 U4atac.1-201ENST00000618345 95 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 MIR4662A-201ENST00000637499 67 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
SMPD4Q9NXE4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 RNU6-833P-201ENST00000363486 107 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 SNORA24-201ENST00000384096 131 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.607-201ENST00000410597 98 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 AC073261.1-201ENST00000429409 121 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 HMGN1P33-201ENST00000432945 451 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 MIR4769-201ENST00000584126 77 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 AC020891.4-201ENST00000605745 93 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 AL020996.3-201ENST00000606617 222 ntBASIC2.1□□□□□ -2.07
SMPD4Q9NXE4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 RNU6-342P-201ENST00000384521 104 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 MIR34C-201ENST00000384831 77 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 MIR206-201ENST00000384872 86 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 AC093850.1-201ENST00000454121 251 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 RPS29P29-201ENST00000456396 171 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 snoU13.23-201ENST00000458863 104 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 RNU7-67P-201ENST00000459003 62 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 RNU7-2P-201ENST00000516096 62 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 SNORA28-201ENST00000606769 126 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 AC022202.1-201ENST00000613515 211 ntBASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SMPD4Q9NXE4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 RNU6-1244P-201ENST00000363614 108 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 SNORD23.1-201ENST00000408212 104 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 RNU6-613P-201ENST00000410412 108 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 RNU7-193P-201ENST00000516723 65 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 AC015712.3-201ENST00000559380 164 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 MIR3152-201ENST00000579801 74 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 MIR548AR-201ENST00000582191 57 ntBASIC2.08□□□□□ -2.08
SMPD4Q9NXE4 RNU6-524P-201ENST00000384270 107 ntBASIC2.07□□□□□ -2.08
SMPD4Q9NXE4 AL445685.2-201ENST00000422551 342 ntBASIC2.07□□□□□ -2.08
SMPD4Q9NXE4 RNU7-12P-201ENST00000516030 62 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms