Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.44□□□□□ -2.18
MKS1Q9NXB0 RNU6-893P-201ENST00000458841 100 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 AC133485.4-201ENST00000561835 220 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 AC138907.4-201ENST00000570107 226 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 AP000753.3-201ENST00000604083 169 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 TUG1_4.1-201ENST00000619464 181 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 AC027335.2-201ENST00000624030 375 ntBASIC1.44□□□□□ -2.18
MKS1Q9NXB0 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
MKS1Q9NXB0 SNORA22.1-201ENST00000362701 134 ntBASIC1.43□□□□□ -2.18
MKS1Q9NXB0 RNA5SP144-201ENST00000410846 116 ntBASIC1.43□□□□□ -2.18
MKS1Q9NXB0 MRPL35P3-201ENST00000421557 364 ntBASIC1.43□□□□□ -2.18
MKS1Q9NXB0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.43□□□□□ -2.18
MKS1Q9NXB0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.43□□□□□ -2.18
MKS1Q9NXB0 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
MKS1Q9NXB0 MIR7843-201ENST00000622274 79 ntBASIC1.43□□□□□ -2.18
MKS1Q9NXB0 MIR377-201ENST00000362145 69 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 RNU6-704P-201ENST00000364162 103 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 Y_RNA.294-201ENST00000364916 102 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 MIR618-201ENST00000385287 98 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 POLR2J4-204ENST00000418424 324 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 AL591806.2-201ENST00000433122 173 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 AC002429.1-201ENST00000437672 148 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 snoU13.23-201ENST00000458863 104 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 AC108081.1-201ENST00000604358 221 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 MIR6715A-201ENST00000615929 79 ntBASIC1.42□□□□□ -2.18
MKS1Q9NXB0 AC008163.1-202ENST00000636004 2889 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 RNU6-205P-201ENST00000390858 107 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 Y_RNA.586-201ENST00000391146 98 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 RNA5SP95-201ENST00000410319 137 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.41□□□□□ -2.18
MKS1Q9NXB0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.41□□□□□ -2.18
MKS1Q9NXB0 MIR4305-201ENST00000583252 102 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 AC104984.5-201ENST00000586878 94 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 AC091895.1-201ENST00000624494 256 ntBASIC1.41□□□□□ -2.18
MKS1Q9NXB0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
MKS1Q9NXB0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 SNORD12C-201ENST00000386307 89 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 AL022718.1-201ENST00000412004 84 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 AC063976.4-201ENST00000421971 163 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 AC036111.3-201ENST00000526389 112 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 AC021443.1-201ENST00000604478 211 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 AL137067.1-201ENST00000615933 120 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.4□□□□□ -2.19
MKS1Q9NXB0 SNORD113.3-201ENST00000364630 78 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 RNU6-580P-201ENST00000365159 107 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 MIR764-201ENST00000390811 85 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 AC108210.2-201ENST00000503681 201 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 AC023827.1-201ENST00000569247 97 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 AC106800.4-201ENST00000614905 153 ntBASIC1.39□□□□□ -2.19
MKS1Q9NXB0 RNU6-647P-201ENST00000364243 107 ntBASIC1.38□□□□□ -2.19
MKS1Q9NXB0 SNORA2B-201ENST00000384583 137 ntBASIC1.38□□□□□ -2.19
MKS1Q9NXB0 SNORD111-201ENST00000408139 94 ntBASIC1.38□□□□□ -2.19
MKS1Q9NXB0 AL158147.1-201ENST00000443970 75 ntBASIC1.38□□□□□ -2.19
MKS1Q9NXB0 snoU13.2-201ENST00000459201 104 ntBASIC1.38□□□□□ -2.19
MKS1Q9NXB0 RNU2-35P-201ENST00000516446 142 ntBASIC1.38□□□□□ -2.19
MKS1Q9NXB0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 MIR539-201ENST00000365690 78 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 RNU7-62P-201ENST00000458856 62 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 RNU7-164P-201ENST00000459221 62 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 SNORD13-201ENST00000459299 104 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 MIR6740-201ENST00000618268 113 ntBASIC1.37□□□□□ -2.19
MKS1Q9NXB0 MIR588-201ENST00000384900 83 ntBASIC1.36□□□□□ -2.19
MKS1Q9NXB0 RNU7-113P-201ENST00000459273 62 ntBASIC1.36□□□□□ -2.19
MKS1Q9NXB0 RNA5SP404-201ENST00000517118 132 ntBASIC1.36□□□□□ -2.19
MKS1Q9NXB0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
MKS1Q9NXB0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
MKS1Q9NXB0 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 AL512326.2-201ENST00000426359 151 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 RNU6-1211P-201ENST00000459179 105 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 AC113410.1-201ENST00000505029 247 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 RNU7-123P-201ENST00000515911 60 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 IGKV1-22-201ENST00000524313 326 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 AC004812.1-201ENST00000540773 146 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 AC015712.3-201ENST00000559380 164 ntBASIC1.35□□□□□ -2.19
MKS1Q9NXB0 SNORD115-2-201ENST00000362842 82 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 RNU1-124P-201ENST00000363861 145 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 SNORD115-20-201ENST00000365099 82 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 Y_RNA.531-201ENST00000384589 121 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 SNORA67.5-201ENST00000391036 107 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 RN7SKP19-201ENST00000516016 252 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 RNU6-971P-201ENST00000516920 106 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 MIR4524B-201ENST00000581569 115 ntBASIC1.34□□□□□ -2.19
MKS1Q9NXB0 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms