Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.3□□□□□ -2.46
CLN6Q9NWW5 MIR1302-2-201ENST00000607096 138 ntBASIC-0.3□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 SNORA63.7-201ENST00000365579 123 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 SNORA8.3-201ENST00000384679 139 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 SNORA53-201ENST00000391141 249 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 AL358176.2-201ENST00000425769 204 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 AC104692.1-201ENST00000472406 90 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 AC090574.1-201ENST00000623186 233 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.31□□□□□ -2.46
CLN6Q9NWW5 AL596211.1-201ENST00000569873 2277 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 RNU6-949P-201ENST00000384040 107 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 RNU2-55P-201ENST00000411146 174 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 AL731563.1-201ENST00000442202 214 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 AL008718.3-201ENST00000610217 321 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.32□□□□□ -2.46
CLN6Q9NWW5 RNU6-652P-201ENST00000365488 107 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 AC096949.1-201ENST00000412047 152 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 RNA5SP153-201ENST00000516498 76 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 SNORA25.16-201ENST00000516741 121 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 AP003072.1-201ENST00000531740 145 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 AC138869.1-201ENST00000568623 124 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 AC091932.4-201ENST00000623386 200 ntBASIC-0.33□□□□□ -2.46
CLN6Q9NWW5 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.34□□□□□ -2.46
CLN6Q9NWW5 RNU6-484P-201ENST00000384016 107 ntBASIC-0.34□□□□□ -2.46
CLN6Q9NWW5 RNU6-269P-201ENST00000391077 97 ntBASIC-0.34□□□□□ -2.46
CLN6Q9NWW5 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.34□□□□□ -2.46
CLN6Q9NWW5 snoU18.1-201ENST00000629629 71 ntBASIC-0.34□□□□□ -2.46
CLN6Q9NWW5 SNORA22.1-201ENST00000362701 134 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 RNU6-326P-201ENST00000365480 107 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 SNORA1-201ENST00000384107 130 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 MIR1197-201ENST00000408818 88 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 RNU6-897P-201ENST00000517135 105 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 DEFB131E-201ENST00000532329 154 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 MIR5197-201ENST00000583721 112 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 MIR376A2-201ENST00000636782 80 ntBASIC-0.35□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.36□□□□□ -2.47
CLN6Q9NWW5 SNORA18-201ENST00000384416 132 ntBASIC-0.36□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.36□□□□□ -2.47
CLN6Q9NWW5 SNORA27.4-201ENST00000516650 95 ntBASIC-0.36□□□□□ -2.47
CLN6Q9NWW5 RNU1-29P-201ENST00000606574 126 ntBASIC-0.36□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 MIR548L-201ENST00000408303 86 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 RNU7-165P-201ENST00000458864 60 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 FGF7P4-201ENST00000509595 295 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 RNU7-70P-201ENST00000516941 66 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 MIR3129-201ENST00000581095 76 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 AC097639.2-201ENST00000603159 172 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 AC139792.2-201ENST00000624218 587 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 MIR6841-201ENST00000637129 72 ntBASIC-0.37□□□□□ -2.47
CLN6Q9NWW5 RNU6-161P-201ENST00000363051 106 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 RNY3P5-201ENST00000384127 102 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 MIR626-201ENST00000385032 94 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 MIR613-201ENST00000385248 95 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 RNA5SP163-201ENST00000410304 99 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 AC021613.1-201ENST00000623880 111 ntBASIC-0.38□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 RNY1P13-201ENST00000365030 105 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 MIR501-201ENST00000390204 84 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 U7.6-201ENST00000610841 64 ntBASIC-0.39□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 RNU4-58P-201ENST00000363192 141 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 SNORA63.5-201ENST00000363548 123 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 RNA5SP245-201ENST00000364239 121 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 SNRPGP8-201ENST00000454064 226 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 SNORD4A-201ENST00000459174 72 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 RNU6-531P-201ENST00000516694 104 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 SNORA40.15-201ENST00000516884 107 ntBASIC-0.4□□□□□ -2.47
CLN6Q9NWW5 MIR101-2-201ENST00000362195 79 ntBASIC-0.41□□□□□ -2.48
CLN6Q9NWW5 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.41□□□□□ -2.48
CLN6Q9NWW5 SNORD115-24-201ENST00000363528 82 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms