Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 RNU4-36P-201ENST00000364294 144 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 RNU6-1131P-201ENST00000364955 107 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 MIR194-1-201ENST00000384892 85 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 RPS3AP1-201ENST00000413190 320 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 DEFB131E-201ENST00000532329 154 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 MIR4764-201ENST00000580680 88 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 FAM71BP1-201ENST00000604431 523 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 MIR7111-201ENST00000619751 72 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 AC008133.2-201ENST00000624540 351 ntBASIC2.36□□□□□ -2.03
TMEM39AQ9NV64 RNU4-67P-201ENST00000364569 141 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 SNORA1.1-201ENST00000364671 133 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 RNU6-409P-201ENST00000384114 104 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 MIR520C-201ENST00000385005 87 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 RNU6-733P-201ENST00000410759 104 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 SNORA72.7-201ENST00000516349 94 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 MIR8055-201ENST00000610739 97 ntBASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
TMEM39AQ9NV64 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TMEM39AQ9NV64 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
TMEM39AQ9NV64 RNU6-616P-201ENST00000384353 107 ntBASIC2.34□□□□□ -2.03
TMEM39AQ9NV64 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
TMEM39AQ9NV64 MIR4781-201ENST00000585250 76 ntBASIC2.34□□□□□ -2.03
TMEM39AQ9NV64 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TMEM39AQ9NV64 RNY3P2-201ENST00000362918 102 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 RNU6-1099P-201ENST00000363533 107 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 SNORA32-201ENST00000384072 121 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 MIR605-201ENST00000385078 83 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 RNA5SP212-201ENST00000391223 107 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 MIR1287-201ENST00000408492 90 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 MTATP8P2-201ENST00000435212 202 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 MIR1270-201ENST00000459320 83 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 RNU6-322P-201ENST00000516010 103 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 MIR2052-201ENST00000636055 55 ntBASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.360-201ENST00000365512 102 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 RNA5SP259-201ENST00000365541 109 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 SNORA40.18-201ENST00000391200 128 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 SNORA7.5-201ENST00000410672 110 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 AC108667.1-201ENST00000428618 249 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 SCARNA23-201ENST00000516060 130 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 RNU6-158P-201ENST00000517104 100 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.93-201ENST00000363066 109 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 RNU6-294P-201ENST00000364999 102 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 MIR488-201ENST00000365739 83 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 RNU6-49P-201ENST00000384256 107 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 MIR653-201ENST00000385279 96 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 JTBP1-201ENST00000441314 247 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 MIR4694-201ENST00000578534 80 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.107-201ENST00000363190 121 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 RNU6-439P-201ENST00000384188 106 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 MIR513A1-201ENST00000385138 129 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 MIR577-201ENST00000385196 96 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 AL451046.2-201ENST00000403074 277 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.601-201ENST00000410500 113 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 AL161935.2-201ENST00000414627 60 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 AC245047.7-201ENST00000440265 293 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 Z97988.1-201ENST00000637697 135 ntBASIC2.3□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.10-201ENST00000362371 110 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 RNU6-832P-201ENST00000363319 107 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.354-201ENST00000365448 111 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 RNU6-679P-201ENST00000391003 106 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 RNU6-521P-201ENST00000516663 105 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.783-201ENST00000613546 102 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 MIR4251-201ENST00000635819 61 ntBASIC2.29□□□□□ -2.04
TMEM39AQ9NV64 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 ZNF355P-201ENST00000427301 3216 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 RNU6-342P-201ENST00000384521 104 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 AL353813.1-201ENST00000440700 253 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 MIR548AO-201ENST00000579992 96 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 MIR8065-201ENST00000620577 100 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TMEM39AQ9NV64 Y_RNA.220-201ENST00000364244 109 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 RNU6-602P-201ENST00000411155 105 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 RNU7-41P-201ENST00000515917 61 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 CYP3A52P-201ENST00000563326 91 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 AL773524.1-201ENST00000614065 229 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.27□□□□□ -2.05
TMEM39AQ9NV64 SNORA18-201ENST00000384416 132 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms