Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RNU6-728P-201ENST00000365375 104 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 RNU6-1292P-201ENST00000383856 107 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.461-201ENST00000384263 103 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 RNU6-679P-201ENST00000391003 106 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 RNU7-45P-201ENST00000459460 63 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 RNU6-1153P-201ENST00000516760 105 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 RNU6-448P-201ENST00000517052 107 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 SNORA4-201ENST00000584302 138 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 AC091932.4-201ENST00000623386 200 ntBASIC0.26□□□□□ -2.37
CCL28Q9NRJ3 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNU6-103P-201ENST00000363686 107 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.176-201ENST00000363815 109 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.483-201ENST00000384380 101 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 MT-TW-201ENST00000387382 68 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNU4-43P-201ENST00000410628 137 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.618-201ENST00000410949 107 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP247-201ENST00000411181 105 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 MTATP8P1-201ENST00000467115 207 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNU6-561P-201ENST00000516222 102 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.720-201ENST00000517166 92 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 AL365205.2-201ENST00000594586 68 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 AL662814.1-201ENST00000617364 121 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 uc_338.16-201ENST00000621804 95 ntBASIC0.25□□□□□ -2.37
CCL28Q9NRJ3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.262-201ENST00000364641 102 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.416-201ENST00000384014 113 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 SNORD93-201ENST00000408813 74 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP237-201ENST00000410414 113 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 RPL39P25-201ENST00000449384 154 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 MIR6734-201ENST00000621166 68 ntBASIC0.24□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 RNU6-238P-201ENST00000363313 106 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP117-201ENST00000365294 118 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.352-201ENST00000365439 102 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 SNORA50A-201ENST00000384225 134 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 Y_RNA.574-201ENST00000384766 95 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 RNU4-83P-201ENST00000410863 133 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 SNORA25.12-201ENST00000516202 82 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP220-201ENST00000516298 104 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 AP003327.1-201ENST00000529684 127 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 MIR3152-201ENST00000579801 74 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 AC243829.3-201ENST00000622177 108 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 AL596211.1-201ENST00000569873 2277 ntBASIC0.23□□□□□ -2.37
CCL28Q9NRJ3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 RNU6-472P-201ENST00000384299 107 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 SNORA20-201ENST00000384662 132 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 MIR548F4-201ENST00000408515 105 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 AP003072.1-201ENST00000531740 145 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 MIR3678-201ENST00000578455 94 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 AC006504.6-201ENST00000590142 199 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 AL442067.1-201ENST00000613261 223 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 MIR6513-201ENST00000621188 64 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 MIR6841-201ENST00000637129 72 ntBASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
CCL28Q9NRJ3 RNU6-597P-201ENST00000365620 102 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 RNU6-1160P-201ENST00000384546 104 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 SEPT7P4-201ENST00000437076 306 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 AC011921.3-201ENST00000605540 361 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.21□□□□□ -2.38
CCL28Q9NRJ3 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 RNU6-978P-201ENST00000364371 103 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 RNU1-133P-201ENST00000364867 167 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 AL121914.1-201ENST00000450188 156 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 SNORD116-25-201ENST00000516517 92 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 RNU7-70P-201ENST00000516941 66 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 AC141846.1-201ENST00000568348 142 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 MIR4643-201ENST00000577473 78 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 MIR4744-201ENST00000581563 82 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 AC021613.1-201ENST00000623880 111 ntBASIC0.2□□□□□ -2.38
CCL28Q9NRJ3 SNORA22.1-201ENST00000362701 134 ntBASIC0.19□□□□□ -2.38
CCL28Q9NRJ3 Y_RNA.76-201ENST00000362931 109 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms