Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR3651-201ENST00000630427 90 ntBASIC3.1□□□□□ -1.91
RTN4Q9NQC3 RNY3P2-201ENST00000362918 102 ntBASIC3.09□□□□□ -1.91
RTN4Q9NQC3 snoU13.25-201ENST00000458945 104 ntBASIC3.09□□□□□ -1.91
RTN4Q9NQC3 RNU6-521P-201ENST00000516663 105 ntBASIC3.09□□□□□ -1.91
RTN4Q9NQC3 DEFB131E-201ENST00000532329 154 ntBASIC3.09□□□□□ -1.91
RTN4Q9NQC3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RTN4Q9NQC3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RTN4Q9NQC3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RTN4Q9NQC3 MIR450A1-201ENST00000362262 91 ntBASIC3.08□□□□□ -1.92
RTN4Q9NQC3 MIR563-201ENST00000385080 79 ntBASIC3.08□□□□□ -1.92
RTN4Q9NQC3 SNORA7.5-201ENST00000410672 110 ntBASIC3.08□□□□□ -1.92
RTN4Q9NQC3 AC141557.1-201ENST00000540982 400 ntBASIC3.08□□□□□ -1.92
RTN4Q9NQC3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RTN4Q9NQC3 AL161722.3-201ENST00000605789 2983 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 RNU6-949P-201ENST00000384040 107 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 Y_RNA.495-201ENST00000384435 112 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 MIR1270-201ENST00000459320 83 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 SNORA4-201ENST00000584302 138 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 AL512310.12-203ENST00000640543 90 ntBASIC3.07□□□□□ -1.92
RTN4Q9NQC3 MIR26A1-201ENST00000362205 77 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 Y_RNA.168-201ENST00000363740 102 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 RNU6-865P-201ENST00000364772 107 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 Y_RNA.360-201ENST00000365512 102 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 RNU6-1165P-201ENST00000410119 107 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 MRPL35P3-201ENST00000421557 364 ntBASIC3.06□□□□□ -1.92
RTN4Q9NQC3 Y_RNA.377-201ENST00000365644 108 ntBASIC3.05□□□□□ -1.92
RTN4Q9NQC3 MIR206-201ENST00000384872 86 ntBASIC3.05□□□□□ -1.92
RTN4Q9NQC3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN4Q9NQC3 SNORA31.2-201ENST00000516019 134 ntBASIC3.05□□□□□ -1.92
RTN4Q9NQC3 SNORA74D-201ENST00000516404 141 ntBASIC3.05□□□□□ -1.92
RTN4Q9NQC3 RNU7-137P-201ENST00000516788 62 ntBASIC3.05□□□□□ -1.92
RTN4Q9NQC3 Y_RNA.98-201ENST00000363109 102 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 RNY1P13-201ENST00000365030 105 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 RNU6-580P-201ENST00000365159 107 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 SNORD38.2-201ENST00000384470 69 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 HMGN2P38-201ENST00000423806 265 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 MIR18B-201ENST00000454574 71 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 AC025033.1-201ENST00000463883 194 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 RNU6-168P-201ENST00000516189 101 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 SNORD67.1-201ENST00000516618 108 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 RN7SKP57-201ENST00000517248 293 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 AC133485.1-201ENST00000567176 124 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 MIR2052-201ENST00000636055 55 ntBASIC3.04□□□□□ -1.92
RTN4Q9NQC3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN4Q9NQC3 RNU6-1313P-201ENST00000362622 102 ntBASIC3.03□□□□□ -1.92
RTN4Q9NQC3 RNA5SP374-201ENST00000362939 125 ntBASIC3.03□□□□□ -1.92
RTN4Q9NQC3 SNORA9-201ENST00000384215 133 ntBASIC3.03□□□□□ -1.92
RTN4Q9NQC3 AL591704.2-201ENST00000421658 181 ntBASIC3.03□□□□□ -1.92
RTN4Q9NQC3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.03□□□□□ -1.92
RTN4Q9NQC3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN4Q9NQC3 MIR4285-201ENST00000581001 85 ntBASIC3.03□□□□□ -1.92
RTN4Q9NQC3 Y_RNA.96-201ENST00000363092 109 ntBASIC3.02□□□□□ -1.93
RTN4Q9NQC3 RNU6-205P-201ENST00000390858 107 ntBASIC3.02□□□□□ -1.93
RTN4Q9NQC3 Y_RNA.601-201ENST00000410500 113 ntBASIC3.02□□□□□ -1.93
RTN4Q9NQC3 RNU6-904P-201ENST00000516206 101 ntBASIC3.02□□□□□ -1.93
RTN4Q9NQC3 SNORA80D-201ENST00000384488 135 ntBASIC3.01□□□□□ -1.93
RTN4Q9NQC3 AC048334.1-201ENST00000477975 159 ntBASIC3.01□□□□□ -1.93
RTN4Q9NQC3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.01□□□□□ -1.93
RTN4Q9NQC3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
RTN4Q9NQC3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RTN4Q9NQC3 RNU6-832P-201ENST00000363319 107 ntBASIC3□□□□□ -1.93
RTN4Q9NQC3 RNU6-1099P-201ENST00000363533 107 ntBASIC3□□□□□ -1.93
RTN4Q9NQC3 MIR6740-201ENST00000618268 113 ntBASIC3□□□□□ -1.93
RTN4Q9NQC3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.99□□□□□ -1.93
RTN4Q9NQC3 RNU6-679P-201ENST00000391003 106 ntBASIC2.99□□□□□ -1.93
RTN4Q9NQC3 AC090255.1-201ENST00000495779 349 ntBASIC2.99□□□□□ -1.93
RTN4Q9NQC3 AC108729.3-201ENST00000513484 108 ntBASIC2.99□□□□□ -1.93
RTN4Q9NQC3 MIR8057-201ENST00000620957 69 ntBASIC2.99□□□□□ -1.93
RTN4Q9NQC3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.98□□□□□ -1.93
RTN4Q9NQC3 MIR422A-201ENST00000362286 90 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 SNORD113.3-201ENST00000364630 78 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 Y_RNA.448-201ENST00000384185 108 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 Y_RNA.677-201ENST00000516401 85 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 Y_RNA.694-201ENST00000516677 117 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 RNU6-158P-201ENST00000517104 100 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 AL442128.1-201ENST00000615151 90 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 AP000553.5-201ENST00000641933 54 ntBASIC2.98□□□□□ -1.93
RTN4Q9NQC3 SNORD45B-201ENST00000364617 72 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 MIR605-201ENST00000385078 83 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 RNU7-48P-201ENST00000458875 63 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 SCARNA23-201ENST00000516060 130 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 SNORA40.13-201ENST00000516379 120 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 RNU6-537P-201ENST00000517277 103 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 AC012676.2-201ENST00000619258 186 ntBASIC2.97□□□□□ -1.93
RTN4Q9NQC3 RNU6-1201P-201ENST00000384227 107 ntBASIC2.96□□□□□ -1.94
RTN4Q9NQC3 MIR577-201ENST00000385196 96 ntBASIC2.96□□□□□ -1.94
RTN4Q9NQC3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.96□□□□□ -1.94
RTN4Q9NQC3 RNA5SP425-201ENST00000410336 112 ntBASIC2.96□□□□□ -1.94
RTN4Q9NQC3 RNU6-970P-201ENST00000516312 107 ntBASIC2.96□□□□□ -1.94
RTN4Q9NQC3 Y_RNA.330-201ENST00000365230 109 ntBASIC2.95□□□□□ -1.94
RTN4Q9NQC3 SNORA2B-201ENST00000384583 137 ntBASIC2.95□□□□□ -1.94
RTN4Q9NQC3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.95□□□□□ -1.94
RTN4Q9NQC3 SNORD12-201ENST00000391002 90 ntBASIC2.95□□□□□ -1.94
RTN4Q9NQC3 SNORD111-201ENST00000408139 94 ntBASIC2.95□□□□□ -1.94
RTN4Q9NQC3 MIR4325-201ENST00000583049 90 ntBASIC2.95□□□□□ -1.94
RTN4Q9NQC3 AP001362.1-201ENST00000625165 124 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms