Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 AP003327.1-201ENST00000529684 127 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 MIR3618-201ENST00000580330 88 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 MIR302B-201ENST00000362188 73 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.155-201ENST00000363632 101 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.290-201ENST00000364879 114 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 SNORA4.2-201ENST00000365313 147 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 MIR516B2-201ENST00000385190 85 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-1275P-201ENST00000391087 107 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-644P-201ENST00000391155 98 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.593-201ENST00000410292 98 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNA5SP144-201ENST00000410846 116 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 AC093850.1-201ENST00000454121 251 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNU2-11P-201ENST00000459191 187 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNU7-34P-201ENST00000459394 64 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNU7-80P-201ENST00000459562 61 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 AC004812.1-201ENST00000540773 146 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 AC012531.4-201ENST00000616509 177 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 AC091304.10-201ENST00000641554 121 ntBASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.78-201ENST00000362970 110 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-1099P-201ENST00000363533 107 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 SNORD38C-201ENST00000384381 69 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 MIR450A2-201ENST00000385022 100 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 SNORA7.5-201ENST00000410672 110 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 SCARNA23-201ENST00000516060 130 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 RNA5SP168-201ENST00000516642 112 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 AC090821.2-201ENST00000523552 176 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 AC022254.1-201ENST00000567857 235 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
SEMA4AQ9H3S1 AP000648.3-201ENST00000623539 4507 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.17-201ENST00000362433 111 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.73-201ENST00000362910 113 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.93-201ENST00000363066 109 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 MIR577-201ENST00000385196 96 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-972P-201ENST00000391208 107 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 RNA5SP225-201ENST00000410874 135 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 AC015922.2-201ENST00000435593 184 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 AC087499.4-201ENST00000448505 178 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 SNORA31.17-201ENST00000516953 127 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 AC021506.2-201ENST00000612354 169 ntBASIC2.14□□□□□ -2.07
SEMA4AQ9H3S1 AL442644.1-201ENST00000454390 3105 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 RNU4-36P-201ENST00000364294 144 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 BTF3P4-201ENST00000418852 495 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 AL353813.1-201ENST00000440700 253 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 MIR3683-201ENST00000580847 82 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 U7.3-201ENST00000616123 62 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 AC021613.1-201ENST00000623880 111 ntBASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SEMA4AQ9H3S1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR424-201ENST00000362227 98 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.360-201ENST00000365512 102 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.454-201ENST00000384224 113 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR7-2-201ENST00000384970 110 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR452-201ENST00000385020 85 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR660-201ENST00000385235 97 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR1912-201ENST00000410389 80 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 AL022718.1-201ENST00000412004 84 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 POLR2J4-204ENST00000418424 324 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR1270-201ENST00000459320 83 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 RPS23P4-201ENST00000487908 423 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-998P-201ENST00000515894 101 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 RNU2-13P-201ENST00000515909 113 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 RNU7-12P-201ENST00000516030 62 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR4778-201ENST00000577635 80 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 MIR2052-201ENST00000636055 55 ntBASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SEMA4AQ9H3S1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-616P-201ENST00000384353 107 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.507-201ENST00000384500 99 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 AL627390.1-201ENST00000396055 340 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-733P-201ENST00000410759 104 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-958P-201ENST00000516995 106 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 MIR3935-201ENST00000583472 104 ntBASIC2.11□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-170P-201ENST00000362832 104 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.190-201ENST00000363964 101 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 RNU4-67P-201ENST00000364569 141 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-497P-201ENST00000365316 104 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 SNORA32-201ENST00000384072 121 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-679P-201ENST00000391003 106 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 SNORA17.3-201ENST00000391159 129 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 HMGN2P19-201ENST00000425149 265 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 AL035398.1-201ENST00000430869 322 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms